RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DNAJC1Q96KC8 554 aaKnown RBP16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 ZSCAN5AQ9BUG6 496 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 TMEM248Q9NWD8 314 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 ERN1O75460 977 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 RPIAP49247 311 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CPSF6Q16630 551 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 ZDHHC24Q6UX98 284 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 GPR21Q99679 349 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 NUSAP1Q9BXS6 441 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 PDLIM7Q9NR12 457 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 TMEM59LQ9UK28 342 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 PAIP2BQ9ULR5 123 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 COL22A1Q8NFW1 1626 aaPredicted RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 PPEF2O14830 753 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 GALNT2Q10471 571 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 ZNF776Q68DI1 518 aaPredicted RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC9A4Q6AI14 798 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CAMKK1Q8N5S9 505 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 C7orf26Q96N11 449 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 WDR6Q9NNW5 1121 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CCDC177Q9NQR7 707 aaPredicted RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 DNAAF2Q9NVR5 837 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 COPG2Q9UBF2 871 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 ANPEPP15144 967 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 SP100P23497 879 aaPredicted RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 RPS24P62847 133 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 RPL38P63173 70 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CASP12Q6UXS9 341 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 TAS1R3Q7RTX0 852 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CUZD1Q86UP6 607 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 DDHD1Q8NEL9 900 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CLEC4CQ8WTT0 213 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 HOPXQ9BPY8 73 aaPredicted RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 REEP1Q9H902 201 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CLDN9O95484 217 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CENPAP49450 140 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 NEK2P51955 445 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 GSTA3Q16772 222 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 PPP4R4Q6NUP7 873 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 B3GNT9Q6UX72 402 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 ZYG11AQ6WRX3 759 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 TSTD1Q8NFU3 115 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 SPATA22Q8NHS9 363 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 RMND5BQ96G75 393 aaPredicted RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 MAGED4Q96JG8 741 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CDCA3Q99618 268 aaPredicted RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 NMUR1Q9HB89 426 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 EXOSC4Q9NPD3 245 aaKnown RBP16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 SPAG4Q9NPE6 437 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 CRTAC1Q9NQ79 661 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 ITM2CQ9NQX7 267 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 EXD2Q9NVH0 621 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 IL36AQ9UHA7 158 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
PCDHA13-202ENST00000409494 H3BNH8 94 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 KDELR3O43731 214 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 OAZ2O95190 189 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC16A1P53985 500 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 MRPS22P82650 360 aaKnown RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 TUBGCP5Q96RT8 1024 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 IL12RB2Q99665 862 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 EIF2S1P05198 315 aaKnown RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 SSR2P43308 183 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 ZNF132P52740 706 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 KHDRBS2Q5VWX1 349 aaKnown RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 ALYREFQ86V81 257 aaKnown RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 ZDHHC13Q8IUH4 622 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 SMG8Q8ND04 991 aaKnown RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 PPCDCQ96CD2 204 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 ZNF607Q96SK3 696 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 CCSER2Q9H7U1 834 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 ARL8BQ9NVJ2 186 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC9A8Q9Y2E8 581 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 HS3ST4Q9Y661 456 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 MGRN1O60291 552 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 GOT2P00505 430 aaKnown RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 CYP11A1P05108 521 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 COX4I1P13073 169 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 LCP2Q13094 533 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 SF1Q15637 639 aaKnown RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 NCBP2-AS2Q69YL0 99 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 TXNDC8Q6A555 127 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 CHMP1BQ7LBR1 199 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 SVOPQ8N4V2 548 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 GPN3Q9UHW5 284 aaPredicted RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 IMPDH2P12268 514 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 PROZP22891 400 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 MS4A13Q5J8X5 152 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 DHDDSQ86SQ9 333 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 PLEKHO2Q8TD55 490 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 LPIN3Q9BQK8 851 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 RHBDL2Q9NX52 303 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
PCDHA13-202ENST00000409494 TCEA3O75764 348 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 CYP7B1O75881 506 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 SYN1P17600 705 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms