RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 IQCF5A8MTL0 148 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 ECI2O75521 394 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 ZNF7P17097 686 aaPredicted RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 BPIP17213 487 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 PTRHD1Q6GMV3 140 aaKnown RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 CPNE9Q8IYJ1 553 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 EEF1AKMT1Q8WVE0 214 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 WDR60Q8WVS4 1066 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 ASB2Q96Q27 587 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 IL26Q9NPH9 171 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 SLCO3A1Q9UIG8 710 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 HCFC2Q9Y5Z7 792 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 GLYATL1P3A0A0U1RQE8 302 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 NPIPB15A6NHN6 443 aaPredicted RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 LRRC14BA6NHZ5 514 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 GAPDHSO14556 408 aaPredicted RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 LMNAP02545 664 aaKnown RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 THRAP10827 490 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 SEMG2Q02383 582 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 NFATC2Q13469 925 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 CBX2Q14781 532 aaPredicted RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 ZRSR2Q15696 482 aaKnown RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 KHDC1Q4VXA5 237 aaKnown RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 C6orf163Q5TEZ5 329 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 CLEC6AQ6EIG7 209 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 GRAMD4Q6IC98 578 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 DPY19L3Q6ZPD9 716 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 USP45Q70EL2 814 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 RBM23Q86U06 439 aaKnown RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 TSPAN33Q86UF1 283 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 FUBP1Q96AE4 644 aaKnown RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 ASIC4Q96FT7 647 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 C19orf43Q9BQ61 176 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 MEAF6Q9HAF1 191 aa20.54■□□□□ 0.88
USP39-203ENST00000409470 NKX1-2Q9UD57 310 aaPredicted RBP20.54■□□□□ 0.88
USP39-203ENST00000409470 RGSL1A5PLK6 1076 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 H0Y3Z8 333 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 ZNF197O14709 1029 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 SLC22A2O15244 555 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 POP4O95707 220 aaKnown RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 TSPAN12O95859 305 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 RB1P06400 928 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 CEBPBP17676 345 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 SPAM1P38567 509 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 C1QTNF8P60827 252 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 RBFAQ8N0V3 343 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 NAT16Q8N8M0 369 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 RTKNQ9BST9 563 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 ZNF385DQ9H6B1 395 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 ZDHHC7Q9NXF8 308 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 NOP53Q9NZM5 478 aaKnown RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 CRLS1Q9UJA2 301 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 MRPS23Q9Y3D9 190 aaKnown RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 NOTCH4Q99466 2003 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 CCDC189A1A4V9 331 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 NCF1BA6NI72 391 aaPredicted RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 NCF1CA8MVU1 366 aaPredicted RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 UGT2B4P06133 528 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 NCF1P14598 390 aaPredicted RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 UGT1A6P19224 532 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 UGT1A1P22309 533 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 UGT1A4P22310 534 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 EEF1DP29692 281 aaKnown RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 ADSLP30566 484 aaPredicted RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 UGT1A3P35503 534 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 UGT1A5P35504 534 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 DMC1Q14565 340 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 GEN1Q17RS7 908 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 ACSBG2Q5FVE4 666 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 CRTC1Q6UUV9 634 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 TPRG1Q6ZUI0 275 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 Q6ZVU0 165 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 SNX32Q86XE0 403 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 ADGRG2Q8IZP9 1017 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 GRIN3AQ8TCU5 1115 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 ACTRT2Q8TDY3 377 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 STMN2Q93045 179 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 ECHDC3Q96DC8 303 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 SCRN2Q96FV2 425 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 LYSMD1Q96S90 227 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 CPEB1Q9BZB8 566 aaKnown RBP20.53■□□□□ 0.88
USP39-203ENST00000409470 DCLRE1BQ9H816 532 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 PIDD1Q9HB75 910 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 MID1IP1Q9NPA3 183 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 DPP7Q9UHL4 492 aa20.53■□□□□ 0.88
USP39-203ENST00000409470 CLCN7P51798 805 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 SH3BP2P78314 561 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 CHRNA6Q15825 494 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 LYPLAL1Q5VWZ2 237 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 NET1Q7Z628 596 aaPredicted RBP20.52■□□□□ 0.88
USP39-203ENST00000409470 ADIPOR2Q86V24 386 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 CLYBLQ8N0X4 340 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 RP9Q8TA86 221 aaKnown RBP20.52■□□□□ 0.88
USP39-203ENST00000409470 VOPP1Q96AW1 172 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 NSUN5Q96P11 429 aaKnown RBP20.52■□□□□ 0.88
USP39-203ENST00000409470 BOCQ9BWV1 1114 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 ZMYM5Q9UJ78 669 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 GNPTGQ9UJJ9 305 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 DHRS7Q9Y394 339 aa20.52■□□□□ 0.88
USP39-203ENST00000409470 COPG1Q9Y678 874 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms