RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 AKAP13Q12802 2813 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 IGHV1OR21-1A0A087WYE8 117 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 CCDC66A2RUB6 948 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 LILRA5A6NI73 299 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 MAP3K7O43318 606 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 VIPP01282 170 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 RALBP11234 206 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 IDSP22304 550 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 HMGCLP35914 325 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 PDX1P52945 283 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 CLN3Q13286 438 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 LDLRAP1Q5SW96 308 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 KATNAL2Q8IYT4 538 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 SYCE1Q8N0S2 351 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 NAGSQ8N159 534 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 GDAP1Q8TB36 358 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 SEC14L1Q92503 715 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 RAPGEF5Q92565 580 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 PRR11Q96HE9 360 aaPredicted RBP12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 TEKT5Q96M29 485 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 OSGEPL1Q9H4B0 414 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 VPS37BQ9H9H4 285 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 GLOD4Q9HC38 313 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 RALYQ9UKM9 306 aaKnown RBP12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 ZNF711Q9Y462 761 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 DNMT3AQ9Y6K1 912 aaPredicted RBP12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 FRYQ5TBA9 3013 aa12.73□□□□□ -0.37
SNORD88B-201ENST00000408454 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 C2orf81A6NN90 581 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 PDZK1P1A8MUH7 402 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 CST8O60676 142 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 CDK14O94921 469 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 AK4P27144 223 aaPredicted RBP12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 MAP4P27816 1152 aaKnown RBP12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 GEMP55040 296 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 MAZP56270 477 aaKnown RBP12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 OR1D5P58170 312 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 PCSK7Q16549 785 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 LONRF2Q1L5Z9 754 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 ATP13A4Q4VNC1 1196 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 DAAM2Q86T65 1068 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 FAM129CQ86XR2 697 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 NRROSQ86YC3 692 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 CDKL3Q8IVW4 592 aaPredicted RBP12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 SLC37A2Q8TED4 501 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 ZDHHC12Q96GR4 267 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 CCDC74BQ96LY2 380 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 PACSIN1Q9BY11 444 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 SPTLC3Q9NUV7 552 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 TMEM98Q9Y2Y6 226 aa12.72□□□□□ -0.37
SNORD88B-201ENST00000408454 LRP4O75096 1905 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 IGHV5-10-1A0A0J9YXX1 117 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 CFAP99D6REC4 459 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 APOC4-APOC2K7ER74 178 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 TJP3O95049 919 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 MAP3K6O95382 1288 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 CRTAMO95727 393 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 GAS8O95995 478 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 PRLP01236 227 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 APOC2P02655 101 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 MT-ND3P03897 115 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 THRAP10827 490 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 ACP5P13686 325 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 TNNT1P13805 278 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 AMD1P17707 334 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 COMTP21964 271 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 CD1CP29017 333 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 SPAM1P38567 509 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 DYNLT1P63172 113 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 GALNT3Q14435 633 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 PRKD1Q15139 912 aaPredicted RBP12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 IYDQ6PHW0 289 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 WASH2PQ6VEQ5 465 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 SPOCD1Q6ZMY3 1216 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 PID1Q7Z2X4 250 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 GLT6D1Q7Z4J2 308 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 TMC3Q7Z5M5 1100 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 BPHLQ86WA6 291 aaPredicted RBP12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 UBL4BQ8N7F7 174 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 CCL4L1Q8NHW4 92 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 HTR3CQ8WXA8 447 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 USP7Q93009 1102 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 CXorf40BQ96DE9 158 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 PANX2Q96RD6 677 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 FCRL5Q96RD9 977 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 FAM117AQ9C073 453 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 ADNPQ9H2P0 1102 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 RDH14Q9HBH5 336 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 CPNE5Q9HCH3 593 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 WASH6PQ9NQA3 447 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms