RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 PCYOX1LQ8NBM8 494 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 PBXIP1Q96AQ6 731 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 FAR2Q96K12 515 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 UBXN10Q96LJ8 280 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 C8orf48Q96LL4 319 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 C1orf74Q96LT6 269 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 PRICKLE1Q96MT3 831 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 SLC22A12Q96S37 553 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 AARSD1Q9BTE6 412 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 TBCDQ9BTW9 1192 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 BOCQ9BWV1 1114 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 SPATA16Q9BXB7 569 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 RNF38Q9H0F5 515 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 SMG9Q9H0W8 520 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 MEAF6Q9HAF1 191 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 MARCH5Q9NX47 278 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 SUN2Q9UH99 717 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 NDUFAF1Q9Y375 327 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 ASB3Q9Y575 518 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 RANBP2P49792 3224 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 C7orf72A4D263 438 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 MROH6A6NGR9 719 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 NME4O00746 187 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 ACOT8O14734 319 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 ZNF189O75820 626 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 CHEK2O96017 543 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 INHAP05111 366 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 GNAO1P09471 354 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 HSPA8P11142 646 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 LBPP18428 481 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 FDXRP22570 491 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 NFKBIAP25963 317 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 YAP1P46937 504 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 HSPA7P48741 367 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 MTPNP58546 118 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 IRX1P78414 480 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 SATB1Q01826 763 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 ZNF33AQ06730 810 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 TRAF2Q12933 501 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 EIF4EBP2Q13542 120 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 LRP8Q14114 963 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 CMPK2Q5EBM0 449 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 SAMD4BQ5PRF9 694 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 HECTD3Q5T447 861 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 AFMIDQ63HM1 303 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 AP1ARQ63HQ0 302 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 TXNDC8Q6A555 127 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 SLC2A7Q6PXP3 512 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 UGT2A3Q6UWM9 527 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 CYHR1Q6ZMK1 362 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 FAM43BQ6ZT52 329 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 CHST15Q7LFX5 561 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 SYVN1Q86TM6 617 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 ZNF683Q8IZ20 524 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 PELI3Q8N2H9 469 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 CPSF7Q8N684 471 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 ARL14EPQ8N8R7 260 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 STAG3L4Q8TBR4 150 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 METTL6Q8TCB7 284 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 DDI1Q8WTU0 396 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 GFM2Q969S9 779 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 TMIGD2Q96BF3 282 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMC6-203ENST00000402989 FEM1CQ96JP0 617 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 PPP1R2P1Q96PQ5 205 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 ZNF385DQ9H6B1 395 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 MRM3Q9HC36 420 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 PFDN4Q9NQP4 134 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 OLA1Q9NTK5 396 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 INTS7Q9NVH2 962 aaKnown RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 TRPM5Q9NZQ8 1165 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 POLR3HQ9Y535 204 aaPredicted RBP4.33□□□□□ -1.72
SMC6-203ENST00000402989 DOCK6Q96HP0 2047 aa4.33□□□□□ -1.72
SMC6-203ENST00000402989 DOCK4Q8N1I0 1966 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 MYOFQ9NZM1 2061 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 VWA8A3KMH1 1905 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 C1orf232A0A0U1RR37 186 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SOCS2O14508 198 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 SEC24AO95486 1093 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 VNN2O95498 520 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 EOMESO95936 686 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CKMP06732 381 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 MTHFD2P13995 350 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PKMP14618 531 aaKnown RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 ZNF23P17027 643 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 EFNA1P20827 205 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 LPOP22079 712 aaPredicted RBP4.32□□□□□ -1.72
SMC6-203ENST00000402989 WEE1P30291 646 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 HMOX2P30519 316 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 DNAJB13P59910 316 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 IL2P60568 153 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 HTRA3P83110 453 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 CYP4F8P98187 520 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 TIAL1Q01085 375 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMC6-203ENST00000402989 HMGCS1Q01581 520 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PLCL1Q15111 1095 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 PAGE3Q5JUK9 113 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ARTNQ5T4W7 220 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 ZFP1Q6P2D0 407 aa4.32□□□□□ -1.72
SMC6-203ENST00000402989 AFTPHQ6ULP2 937 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms