RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PLXNA2O75051 1894 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 NEMP2A6NFY4 417 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 UPK3BL1B0FP48 263 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 E5RI56 91 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 UPK3BL2E5RIL1 263 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 CHRNGP07510 517 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 KCNA5P22460 613 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 VIPR1P32241 457 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 KCNC1P48547 511 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 SPINT3P49223 89 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 SEMG2Q02383 582 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 TDHQ8IZJ6 230 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 LSMEM2Q8N112 164 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 NXPE1Q8N323 547 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 L3HYPDHQ96EM0 354 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 EBF4Q9BQW3 602 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 CLPBQ9H078 707 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 GALPQ9UBC7 116 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 CRLS1Q9UJA2 301 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 GNPTGQ9UJJ9 305 aa11.36□□□□□ -0.59
SMARCAL1-203ENST00000392128 KERAO60938 352 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 SMIM24O75264 130 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 TSPAN12O95859 305 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 TIMP2P16035 220 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CHRM3P20309 590 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CA5AP35218 305 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 RPL14P50914 215 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CLCN7P51798 805 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 KDSRQ06136 332 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 RUNX3Q13761 415 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 ARHGEF7Q14155 803 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 OR4D1Q15615 310 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CFAP157Q5JU67 520 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CES5AQ6NT32 575 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 ALYREFQ86V81 257 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CCNYL1Q8N7R7 359 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 TERB1Q8NA31 727 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 SIDT2Q8NBJ9 832 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 ST13P5Q8NFI4 369 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 GIMAP7Q8NHV1 300 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 STAG3L4Q8TBR4 150 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 ELSPBP1Q96BH3 223 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 MYADMQ96S97 322 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 ATOH8Q96SQ7 321 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 SLC30A3Q99726 388 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 S1PR5Q9H228 398 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 MTG2Q9H4K7 406 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CLEC1BQ9P126 229 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 TCF20Q9UGU0 1960 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 FCHO1O14526 889 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CCDC22O60826 627 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 TPBGLP0DKB5 382 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 PSMC3P17980 439 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 UGT1A6P19224 532 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 IMPDH1P20839 514 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 UGT1A1P22309 533 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 UGT1A4P22310 534 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 MPSTP25325 297 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 UGT1A3P35503 534 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 UGT1A5P35504 534 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 MAGEA9P43362 315 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 IDH3AP50213 366 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 IL2P60568 153 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 GALNT1Q10472 559 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 TUBB3Q13509 450 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 HNRNPA1L2Q32P51 320 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 LRRC73Q5JTD7 316 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 YAF2Q8IY57 180 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 STON2Q8WXE9 905 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 ULK4Q96C45 1275 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 MOCOSQ96EN8 888 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 BOCQ9BWV1 1114 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 PLA2G2FQ9BZM2 168 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 NMUR2Q9GZQ4 415 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 PCDH12Q9NPG4 1184 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 DHRS7Q9Y394 339 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 CAPN7Q9Y6W3 813 aa11.35□□□□□ -0.59
SMARCAL1-203ENST00000392128 PIKFYVEQ9Y2I7 2098 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 XIRP2A4UGR9 3374 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 EDDM13A0A1B0GTR0 161 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 SLCO1B7G3V0H7 640 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 MATN2O00339 956 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 PRNPP04156 253 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 SERPINA6P08185 405 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 MTHFD2P13995 350 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 OPRD1P41143 372 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 EIF2DP41214 584 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 CCR10P46092 362 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 DCDC1P59894 354 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 KRT72Q14CN4 511 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 FNDC3BQ53EP0 1204 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 PTRHD1Q6GMV3 140 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 EPGNQ6UW88 154 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 MACC1Q6ZN28 852 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 DPPA4Q7L190 304 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 ASRGL1Q7L266 308 aa11.34□□□□□ -0.59
SMARCAL1-203ENST00000392128 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms