RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 BNIP1Q12981 228 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 RBM20Q5T481 1227 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3GQ6DHY5 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3CQ6IPX1 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CMTR2Q8IYT2 770 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3Q8IZP1 549 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 DIS3LQ8TF46 1054 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 LZICQ8WZA0 190 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 PGAP3Q96FM1 320 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF570Q96NI8 536 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 ADNPQ9H2P0 1102 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 MFSD1Q9H3U5 465 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TMCO1Q9UM00 188 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 PRKG2Q13237 762 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 SQLEQ14534 574 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 UBAP2Q5T6F2 1119 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 KIAA0319Q5VV43 1072 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 DCAF4L2Q8NA75 395 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 LEMD2Q8NC56 503 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 RP9Q8TA86 221 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 OVCA2Q8WZ82 227 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF778Q96MU6 729 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 PSKH2Q96QS6 385 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 DENND2DQ9H6A0 471 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 ADAMTSL1Q8N6G6 1762 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TMEM189-UBE2V1I3L0A0 370 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 LEFTY2O00292 366 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF682O95780 498 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CHRNGP07510 517 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CNPP09543 421 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 FGFR3P22607 806 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 PSMD8P48556 350 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 DEFB103AP81534 67 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 DSC3Q14574 896 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CYP2A13Q16696 494 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CARD16Q5EG05 197 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBCELQ5QJ74 424 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 UTS2BQ765I0 119 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 BBS7Q8IWZ6 715 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CENPLQ8N0S6 344 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 SIDT2Q8NBJ9 832 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 DNAJB14Q8TBM8 379 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CYB5D2Q8WUJ1 264 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF184Q99676 751 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 CCT7Q99832 543 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 IL23AQ9NPF7 189 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 MTMR10Q9NXD2 777 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 NKX1-2Q9UD57 310 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 WNK3Q9BYP7 1800 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 SIN3BO75182 1162 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 RFPL2O75678 378 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 RNASEH2AO75792 299 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ALDH1A2O94788 518 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 DNTTP04053 509 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 NELFEP18615 380 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 MSX2P35548 267 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 HSPA7P48741 367 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 HK2P52789 917 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 SLC18A1P54219 525 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 PSME3P61289 254 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 SLC18A2Q05940 514 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 XKR6Q5GH73 641 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ZDHHC20Q5W0Z9 365 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF621Q6ZSS3 439 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 BEND5Q7L4P6 421 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 TAS1R1Q7RTX1 841 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 PPP3R2Q96LZ3 170 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 TBCDQ9BTW9 1192 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ATG10Q9H0Y0 220 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 CSNK1G1Q9HCP0 422 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 STX18Q9P2W9 335 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 COL11A2P13942 1736 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 IQCF5A8MTL0 148 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 STK16O75716 305 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 EPOP01588 193 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 TYRP14679 529 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ITPKAP23677 461 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 NAA20P61599 178 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ELP6Q0PNE2 266 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ZBTB49Q6ZSB9 765 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ZBTB2Q8N680 514 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 CLDN19Q8N6F1 224 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 CNTD1Q8N815 330 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 FIG4Q92562 907 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 KCNN1Q92952 543 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 CASD1Q96PB1 797 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 INTS10Q9NVR2 710 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 ZSCAN9O15535 394 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 PSMG1O95456 288 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 IGFBP6P24592 240 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 RPIAP49247 311 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 RAB33AQ14088 237 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 XKR4Q5GH76 650 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 PAGE2BQ5JRK9 111 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 METTL21CQ5VZV1 264 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 NAPRTQ6XQN6 538 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 GPR22Q99680 433 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 FBXL21Q9UKT6 434 aa14.09□□□□□ -0.15
SHROOM1-203ENST00000378679 H3BM21 787 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 ATP6V1C1P21283 382 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms