RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 KYAT1Q16773 422 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 TMEM236Q5W0B7 351 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ERMP1Q7Z2K6 904 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 C11orf74Q86VG3 221 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 CILP2Q8IUL8 1156 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 KLHL25Q9H0H3 589 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 TUBB1Q9H4B7 451 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 RPF2Q9H7B2 306 aaKnown RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ENTPD7Q9NQZ7 604 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 VPS45Q9NRW7 570 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 SUCOQ9UBS9 1254 aaKnown RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ARID2Q68CP9 1835 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 A0A087X1B8 175 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 C17orf102A2RUQ5 167 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 KDM1AO60341 852 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 HSPA1AP0DMV8 641 aaKnown RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 HSPA1BP0DMV9 641 aaKnown RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 MTHFRP42898 656 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 TGFBIQ15582 683 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 UBXN11Q5T124 520 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ABRAXAS1Q6UWZ7 409 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 MBOAT1Q6ZNC8 495 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ERI1Q8IV48 349 aaKnown RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 C2CD4AQ8NCU7 369 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 GID8Q9NWU2 228 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 SMPD3Q9NY59 655 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 PLK2Q9NYY3 685 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 SLC8A2Q9UPR5 921 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 DNAH14Q0VDD8 3507 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 H0Y858 1186 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 MATN3O15232 486 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 F9P00740 461 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 SHMT2P34897 504 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 NUP107P57740 925 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 IHHQ14623 411 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 DUSP28Q4G0W2 176 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 NOL9Q5SY16 702 aaKnown RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ENPP6Q6UWR7 440 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 CNIH3Q8TBE1 160 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 IGSF8Q969P0 613 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 LINGO1Q96FE5 620 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 TSPAN17Q96FV3 270 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ZNF597Q96LX8 424 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ADAM2Q99965 735 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 RHNO1Q9BSD3 238 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 TRIM15Q9C019 465 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 NSMCE4AQ9NXX6 385 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 VPS51Q9UID3 782 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 COQ6Q9Y2Z9 468 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 DNAJC25-GNG10A0A024R161 153 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 RAMP2O60895 175 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 ECI2O75521 394 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 ESRRBO95718 433 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 TCF3P15923 654 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 HMOX2P30519 316 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 GKP32189 559 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 TMED10P49755 219 aaKnown RBP11.71□□□□□ -0.53
MCF2L-202ENST00000375597 KCNQ1P51787 676 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 EMP3P54852 163 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 TBX4P57082 545 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 RPS24P62847 133 aaKnown RBP11.71□□□□□ -0.53
MCF2L-202ENST00000375597 APOFQ13790 326 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 PAGE2BQ5JRK9 111 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 CARM1Q86X55 608 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 TMBIM1Q969X1 311 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 MYEOVQ96EZ4 313 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 CCDC97Q96F63 343 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-202ENST00000375597 SLC2A13Q96QE2 648 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 HERC2P3Q9BVR0 1158 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 PLGRKTQ9HBL7 147 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 KLQ9UEF7 1012 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 PAIP2BQ9ULR5 123 aaKnown RBP11.71□□□□□ -0.53
MCF2L-202ENST00000375597 TSC22D4Q9Y3Q8 395 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 SLC30A1Q9Y6M5 507 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 LTBP3Q9NS15 1303 aa11.71□□□□□ -0.53
MCF2L-202ENST00000375597 MUSKO15146 869 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 MITFO75030 526 aaPredicted RBP11.71□□□□□ -0.54
MCF2L-202ENST00000375597 MYCLP1P12525 358 aaPredicted RBP11.71□□□□□ -0.54
MCF2L-202ENST00000375597 BMXP51813 675 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 CPSF6Q16630 551 aaKnown RBP eCLIP11.71□□□□□ -0.54
MCF2L-202ENST00000375597 UGT3A2Q3SY77 523 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 PIK3R6Q5UE93 754 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 ANKS6Q68DC2 871 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 GLT6D1Q7Z4J2 308 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 R3HCC1LQ7Z5L2 792 aaKnown RBP11.71□□□□□ -0.54
MCF2L-202ENST00000375597 LGI2Q8N0V4 545 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 CENPSQ8N2Z9 138 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.54
MCF2L-202ENST00000375597 KLHL23Q8NBE8 558 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 FNDC8Q8TC99 324 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 BIRC7Q96CA5 298 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 PLEKHA8Q96JA3 519 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 RANBP9Q96S59 729 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms