RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 INHBCP55103 352 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 HERVK_113P63132 956 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.32
VPS13B-201ENST00000355155 GBX1Q14549 363 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 OR4D1Q15615 310 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 VITQ6UXI7 678 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 GPR26Q8NDV2 337 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 GPR21Q99679 349 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 ERVK-6Q9BXR3 956 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 TMEM245Q9H330 911 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 ZNF385DQ9H6B1 395 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 ZDHHC3Q9NYG2 299 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 TTC34A8MYJ7 566 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 ANKRD65E5RJM6 399 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 SMIM24O75264 130 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CTSLP07711 333 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CHRM1P11229 460 aaPredicted RBP17.07■□□□□ 0.32
VPS13B-201ENST00000355155 ADSLP30566 484 aaPredicted RBP17.07■□□□□ 0.32
VPS13B-201ENST00000355155 TSPAN33Q86UF1 283 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 SLC28A3Q9HAS3 691 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 EML4Q9HC35 981 aaKnown RBP17.07■□□□□ 0.32
VPS13B-201ENST00000355155 SYCE1LA8MT33 242 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 OR1I1O60431 355 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 FGF4P08620 206 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CALB2P22676 271 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 LIG3P49916 1009 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CREB5Q02930 508 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 RALGDSQ12967 914 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 ENPP2Q13822 863 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CHRNA6Q15825 494 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 TXNDC11Q6PKC3 985 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 NRSN1Q8IZ57 195 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 RYBPQ8N488 228 aaPredicted RBP17.07■□□□□ 0.32
VPS13B-201ENST00000355155 SPATA6LQ8N4H0 392 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CPA6Q8N4T0 437 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CPSF7Q8N684 471 aaKnown RBP17.07■□□□□ 0.32
VPS13B-201ENST00000355155 NSL1Q96IY1 281 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 EBF4Q9BQW3 602 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 NMUR2Q9GZQ4 415 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 RASSF4Q9H2L5 321 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 B4GALT6Q9UBX8 382 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 TRMT6Q9UJA5 497 aaKnown RBP17.07■□□□□ 0.32
VPS13B-201ENST00000355155 CAPN7Q9Y6W3 813 aa17.07■□□□□ 0.32
VPS13B-201ENST00000355155 UBA6A0AVT1 1052 aaPredicted RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 H0Y858 1186 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 UGT2B4P06133 528 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 BMP1P13497 986 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 NQO1P15559 274 aaKnown RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 CA5AP35218 305 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 UNC50Q53HI1 259 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 TRIM68Q6AZZ1 485 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 METTL2BQ6P1Q9 378 aaKnown RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 ALG9Q9H6U8 611 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 ASB8Q9H765 288 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 COG4Q9H9E3 785 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 PKD2L2Q9NZM6 624 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 MKI67P46013 3256 aaKnown RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 EDDM13A0A1B0GTR0 161 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 TRIM24O15164 1050 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 CHRNGP07510 517 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 CBSLP0DN79 551 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 C7P10643 843 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 CBSP35520 551 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 HNRNPA1L2Q32P51 320 aaKnown RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 ALYREFQ86V81 257 aaKnown RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 TTC16Q8NEE8 873 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 SLC30A3Q99726 388 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 CERS4Q9HA82 394 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 ZFP14Q9HCL3 533 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 ZDHHC2Q9UIJ5 367 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 MTF2Q9Y483 593 aaPredicted RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 ECI2O75521 394 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 LEFTY1O75610 366 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 SLC4A1P02730 911 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 MPSTP25325 297 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 PTPN4P29074 926 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 OPRD1P41143 372 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 NSG1P42857 185 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 IL2P60568 153 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 ACCSLQ4AC99 568 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 PREPLQ4J6C6 727 aaPredicted RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 TECPR1Q7Z6L1 1165 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 NLRP8Q86W28 1048 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 CHCHD4Q8N4Q1 142 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 NAT16Q8N8M0 369 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 CYB5D2Q8WUJ1 264 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 FUBP1Q96AE4 644 aaKnown RBP17.06■□□□□ 0.32
VPS13B-201ENST00000355155 VPS35Q96QK1 796 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 MRGBPQ9NV56 204 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 DEC1Q9P2X7 70 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 GALPQ9UBC7 116 aa17.06■□□□□ 0.32
VPS13B-201ENST00000355155 DOCK8Q8NF50 2099 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 PRRT4C9JH25 899 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 NIPSNAP2O75323 286 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 RPS17P08708 135 aaKnown RBP17.05■□□□□ 0.32
VPS13B-201ENST00000355155 IRX1P78414 480 aaPredicted RBP17.05■□□□□ 0.32
VPS13B-201ENST00000355155 CDC16Q13042 620 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 CDKL4Q5MAI5 379 aa17.05■□□□□ 0.32
VPS13B-201ENST00000355155 GPRC6AQ5T6X5 926 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms