RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 NUF2Q9BZD4 464 aa14.83□□□□□ -0.04
TPM3-205ENST00000328159 NKX2-4Q9H2Z4 354 aa14.83□□□□□ -0.04
TPM3-205ENST00000328159 IKZF3Q9UKT9 509 aa14.83□□□□□ -0.04
TPM3-205ENST00000328159 GOLGA8QA0A0J9YX86 632 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 GOLGA8OA6NCC3 632 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 GOLGA8CPA6NN73 597 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 TTC34A8MYJ7 566 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 E9PBE3 544 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 SPECC1L-ADORA2AF8WAN1 911 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 GOLGA8NF8WBI6 632 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 KLHL41O60662 606 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 TSPAN12O95859 305 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 MTHFD2P13995 350 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 FSHRP23945 695 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 CPA2P48052 419 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 DGKGP49619 791 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 IL2P60568 153 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 HERVK_113P63132 956 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 GALNT1Q10472 559 aaPredicted RBP14.82□□□□□ -0.04
TPM3-205ENST00000328159 RIPK1Q13546 671 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 GPR33Q49SQ1 333 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 RPS27LQ71UM5 84 aaKnown RBP14.82□□□□□ -0.04
TPM3-205ENST00000328159 CUZD1Q86UP6 607 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 RBFAQ8N0V3 343 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 GPR26Q8NDV2 337 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 WFIKKN2Q8TEU8 576 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 GDPD5Q8WTR4 605 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 LINGO1Q96FE5 620 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 ASIC4Q96FT7 647 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 HEPHQ9BQS7 1158 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 ERVK-6Q9BXR3 956 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 CADM1Q9BY67 442 aaKnown RBP14.82□□□□□ -0.04
TPM3-205ENST00000328159 CLPBQ9H078 707 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 WDR55Q9H6Y2 383 aaPredicted RBP14.82□□□□□ -0.04
TPM3-205ENST00000328159 BRD9Q9H8M2 597 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 CRLS1Q9UJA2 301 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 RNF112Q9ULX5 631 aa14.82□□□□□ -0.04
TPM3-205ENST00000328159 LAMA2P24043 3122 aaKnown RBP14.82□□□□□ -0.04
TPM3-205ENST00000328159 NPEPPSL1A6NEC2 478 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 TMEM233B4DJY2 109 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 SUPT3HB4E1H0 165 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 CDC7O00311 574 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 NEMP1O14524 444 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 GYG2O15488 501 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 SUPT3HO75486 399 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 SUPT7LO94864 414 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 ASLP04424 464 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 SRPRAP08240 638 aaKnown RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 CHRM1P11229 460 aaPredicted RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 UGT1A6P19224 532 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 UGT1A1P22309 533 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 UGT1A4P22310 534 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 LHCGRP22888 699 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 ACRV1P26436 265 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 UGT1A3P35503 534 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 UGT1A5P35504 534 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 VASPP50552 380 aaPredicted RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 CLCN7P51798 805 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 POLR2LP62875 67 aaKnown RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 KDSRQ06136 332 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 KCNC3Q14003 757 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 TSNQ15631 228 aaKnown RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 PDCD2Q16342 344 aaPredicted RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 RARS2Q5T160 578 aaKnown RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 PTRHD1Q6GMV3 140 aaKnown RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 ACAD11Q709F0 780 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 AFAP1L2Q8N4X5 818 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 TEX9Q8N6V9 391 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 BPIFB1Q8TDL5 484 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 EEF1AKMT1Q8WVE0 214 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 SMARCD2Q92925 531 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 CCDC97Q96F63 343 aaPredicted RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 FAR2Q96K12 515 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 PPP1R36Q96LQ0 422 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 ASB16Q96NS5 453 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 CCDC28BQ9BUN5 200 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 CIPCQ9C0C6 399 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 SARS2Q9NP81 518 aaKnown RBP14.81□□□□□ -0.04
TPM3-205ENST00000328159 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.81□□□□□ -0.04
TPM3-205ENST00000328159 TAS2R1Q9NYW7 299 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 GNPTGQ9UJJ9 305 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 SLC8A2Q9UPR5 921 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 CDYLQ9Y232 598 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 DHRS7Q9Y394 339 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 WASF2Q9Y6W5 498 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 PLXNB3Q9ULL4 1909 aa14.81□□□□□ -0.04
TPM3-205ENST00000328159 TRPC5OSA6NMA1 111 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 IQCF5A8MTL0 148 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 A8MUI8 341 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 B2RBV5 119 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 BTN3A1O00481 513 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 ECI2O75521 394 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 ATP6V1G2O95670 118 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 GFAPP14136 432 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 ARSAP15289 507 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 EPHA3P29320 983 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 PTSQ03393 145 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 PFKFB4Q16877 469 aa14.8□□□□□ -0.04
TPM3-205ENST00000328159 LSM12Q3MHD2 195 aaKnown RBP14.8□□□□□ -0.04
TPM3-205ENST00000328159 BRAT1Q6PJG6 821 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms