RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 TMEM125Q96AQ2 219 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 CDKN2AIPNLQ96HQ2 116 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 FAR2Q96K12 515 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 SEPT5Q99719 369 aaPredicted RBP13.03□□□□□ -0.32
CLGN-201ENST00000325617 KCTD14Q9BQ13 255 aaPredicted RBP13.03□□□□□ -0.32
CLGN-201ENST00000325617 ANKRD60Q9BZ19 345 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 MFSD1Q9H3U5 465 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 ALG2Q9H553 416 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 CATSPERZQ9NTU4 200 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 TMCO1Q9UM00 188 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
CLGN-201ENST00000325617 MOXD2PA6NHM9 499 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 AP3B1O00203 1094 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 SLC7A4O43246 635 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 RAMP2O60895 175 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 GUCA1CO95843 209 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 TPP2P29144 1249 aaPredicted RBP13.02□□□□□ -0.32
CLGN-201ENST00000325617 TRAP1Q12931 704 aaKnown RBP13.02□□□□□ -0.32
CLGN-201ENST00000325617 TAF10Q12962 218 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 SLC44A4Q53GD3 710 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 AFMIDQ63HM1 303 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 ELMSAN1Q6PJG2 1045 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 KIAA0408Q6ZU52 694 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 C16orf59Q7L2K0 433 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 KLHDC8BQ8IXV7 354 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 THEM5Q8N1Q8 247 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 LZTR1Q8N653 840 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 CCDC126Q96EE4 140 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 TBCDQ9BTW9 1192 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 ARHGAP39Q9C0H5 1083 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 CXorf21Q9HAI6 301 aa13.02□□□□□ -0.32
CLGN-201ENST00000325617 OAS3Q9Y6K5 1087 aaKnown RBP13.02□□□□□ -0.32
CLGN-201ENST00000325617 FFAR3O14843 346 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 GPR42O15529 346 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 NOBOXO60393 691 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 RSL1D1O76021 490 aaKnown RBP13.02□□□□□ -0.33
CLGN-201ENST00000325617 CELF2O95319 508 aaKnown RBP13.02□□□□□ -0.33
CLGN-201ENST00000325617 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
CLGN-201ENST00000325617 B3GALT4O96024 378 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 HNRNPCP07910 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
CLGN-201ENST00000325617 IL7RP16871 459 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 ZNF182P17025 639 aaPredicted RBP13.02□□□□□ -0.33
CLGN-201ENST00000325617 CTGFP29279 349 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 LAPTM4AQ15012 233 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 USP41Q3LFD5 358 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 AARS2Q5JTZ9 985 aaKnown RBP13.02□□□□□ -0.33
CLGN-201ENST00000325617 MILR1Q7Z6M3 343 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 ITIH5Q86UX2 942 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 FNDC5Q8NAU1 212 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 MDGA1Q8NFP4 955 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 OR6K2Q8NGY2 324 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 CLHC1Q8NHS4 586 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 MIPOL1Q8TD10 442 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 L3HYPDHQ96EM0 354 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 HGH1Q9BTY7 390 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 YIPF2Q9BWQ6 316 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 ATP13A1Q9HD20 1204 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 PLK2Q9NYY3 685 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 XIRP2A4UGR9 3374 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 WISP3O95389 354 aaPredicted RBP13.02□□□□□ -0.33
CLGN-201ENST00000325617 BMP2P12643 396 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 PRKACGP22612 351 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 HOXC13P31276 330 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 GDF5P43026 501 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 RAB39AQ14964 217 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 IMPG1Q17R60 797 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 NADSYN1Q6IA69 706 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 NANOGP8Q6NSW7 305 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 USP50Q70EL3 339 aaPredicted RBP13.02□□□□□ -0.33
CLGN-201ENST00000325617 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 LGI2Q8N0V4 545 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 LRRC43Q8N309 656 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 ANKFN1Q8N957 763 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 BPIFB6Q8NFQ5 453 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 BIRC7Q96CA5 298 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 MUS81Q96NY9 551 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 ARMC7Q9H6L4 198 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 NANOGQ9H9S0 305 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 SMURF2Q9HAU4 748 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 FKBPLQ9UIM3 349 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 GPR45Q9Y5Y3 372 aa13.02□□□□□ -0.33
CLGN-201ENST00000325617 AXIN1O15169 862 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 PRAMEF12O95522 483 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 NFKBIAP25963 317 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 SHMT2P34897 504 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 ZFP36L2P47974 494 aaKnown RBP13.01□□□□□ -0.33
CLGN-201ENST00000325617 PSMD8P48556 350 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 CCT8P50990 548 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 BLOC1S3Q6QNY0 202 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 RAB44Q7Z6P3 723 aaPredicted RBP13.01□□□□□ -0.33
CLGN-201ENST00000325617 SNX29P2Q8IUI4 249 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 TMEM126BQ8IUX1 230 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 ZNF683Q8IZ20 524 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 LPCAT1Q8NF37 534 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 FBXO30Q8TB52 745 aa13.01□□□□□ -0.33
CLGN-201ENST00000325617 FBXO32Q969P5 355 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms