RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 PHC3Q8NDX5 983 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 BTN2A3PQ96KV6 586 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 WBP11Q9Y2W2 641 aaKnown RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SNAP91O60641 907 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 KLF8O95600 359 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 ALOX5P09917 674 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SLC25A52Q3SY17 297 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 RASSF6Q6ZTQ3 369 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SLC22A15Q8IZD6 547 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 RBFAQ8N0V3 343 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 OR13C4Q8NGS5 318 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 DQX1Q8TE96 717 aaKnown RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 HSFY1Q96LI6 401 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 KLHL4Q9C0H6 718 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 DNAJB4Q9UDY4 337 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 C4BPAP04003 597 aaKnown RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 LINGO3P0C6S8 592 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SERPINB1P30740 379 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SPAM1P38567 509 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 GBE1Q04446 702 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 OLIG2Q13516 323 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 FAM187BQ17R55 369 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 FKBP1CQ5VVH2 108 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CHRDL2Q6WN34 429 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 TTLL10Q6ZVT0 673 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 OR6Y1Q8NGX8 325 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 FAM83DQ9H4H8 585 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 TLR9Q9NR96 1032 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 INSL6Q9Y581 213 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 GRXCR1A8MXD5 290 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 USP46P62068 366 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 NDUFA9Q16795 377 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SPESP1Q6UW49 350 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 NKAPQ8N5F7 415 aaKnown RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 ZFP28Q8NHY6 868 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 FAM163AQ96GL9 167 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 PCDHGA3Q9Y5H0 932 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 NRP2O60462 931 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PSIP1O75475 530 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 IFNGR2P38484 337 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 BDKRB1P46663 353 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 RPL14P50914 215 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ARHGAP36Q6ZRI8 547 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TSPAN14Q8NG11 270 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 AIF1LQ9BQI0 150 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PDCD10Q9BUL8 212 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 RIOK2Q9BVS4 552 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 SNX15Q9NRS6 342 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 IKZF3Q9UKT9 509 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TGFB1I1O43294 461 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 BNC1Q01954 994 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 SLC22A8Q8TCC7 542 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 KREMEN1Q96MU8 473 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 FAM192AQ9GZU8 254 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 GIN1Q9NXP7 522 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 SRRDQ9UH36 339 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 IL33O95760 270 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PRNPP04156 253 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 JAK1P23458 1154 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 DEFA1P59665 94 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 DEFA3P59666 94 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PPP2R2BQ00005 443 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 GNA12Q03113 381 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 KCTD21Q4G0X4 260 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 C1orf189Q5VU69 101 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TRIQKQ629K1 86 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TATDN1Q6P1N9 297 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TSEN2Q8NCE0 465 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 DNAJC19Q96DA6 116 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 SIKE1Q9BRV8 207 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 RASSF1Q9NS23 344 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 DNAJC11Q9NVH1 559 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 MCUBQ9NWR8 336 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ANKRD6Q9Y2G4 727 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 SMAD9O15198 467 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 RPIAP49247 311 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CEBPGP53567 150 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 SULT2A1Q06520 285 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TSNQ15631 228 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CA9Q16790 459 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 MBLAC2Q68D91 279 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CAPN13Q6MZZ7 669 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CNKSR3Q6P9H4 555 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 KLHL35Q6PF15 583 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 KBTBD2Q8IY47 623 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CENPIQ92674 756 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 NUS1Q96E22 293 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 MRPS30Q9NP92 439 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 NOS1APO75052 506 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CLDN11O75508 207 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 LDLRP01130 860 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 OMPP47874 163 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 SLC11A1P49279 550 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CBFBQ13951 182 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PTPRCAPQ14761 206 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PITRM1Q5JRX3 1037 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 VWA5B1Q5TIE3 1220 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 USP53Q70EK8 1073 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CLNKQ7Z7G1 428 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms