RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SETMARQ53H47 684 aaPredicted RBP9.41□□□□□ -0.9
RFX3-201ENST00000302303 GPRC6AQ5T6X5 926 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 PDPK2PQ6A1A2 396 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 ZNF549Q6P9A3 640 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 AFTPHQ6ULP2 937 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 XKR5Q6UX68 686 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 TRIM74Q86UV6 250 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 SERPINA9Q86WD7 417 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 SLC22A18ASQ8N1D0 253 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 NXPE1Q8N323 547 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 C2CD4AQ8NCU7 369 aaPredicted RBP9.41□□□□□ -0.9
RFX3-201ENST00000302303 DDHD1Q8NEL9 900 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 ACVR1CQ8NER5 493 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 GLYATL1Q969I3 302 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 SLC6A18Q96N87 628 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 TTC25Q96NG3 672 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 DHRS4Q9BTZ2 278 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 APOOQ9BUR5 198 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 P2RY12Q9H244 342 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 ACSS3Q9H6R3 686 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 RAD18Q9NS91 495 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 IARS2Q9NSE4 1012 aaKnown RBP9.41□□□□□ -0.9
RFX3-201ENST00000302303 RYDENQ9NUL5 291 aaKnown RBP9.41□□□□□ -0.9
RFX3-201ENST00000302303 KCTD5Q9NXV2 234 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 EURLQ9NYK6 297 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 FBXO5Q9UKT4 447 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 MED16Q9Y2X0 877 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 OR1A2Q9Y585 309 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 PCDHGA2Q9Y5H1 932 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 PRSS21Q9Y6M0 314 aa9.41□□□□□ -0.9
RFX3-201ENST00000302303 TMEM202A6NGA9 273 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 DLL1O00548 723 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 INPP4BO15327 924 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 MTX2O75431 263 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 SPAG6O75602 509 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 HOXC4P09017 264 aaPredicted RBP9.4□□□□□ -0.91
RFX3-201ENST00000302303 PYGBP11216 843 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 PAMP19021 973 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 SLC1A2P43004 574 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 GPR1P46091 355 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 LEPRP48357 1165 aaKnown RBP9.4□□□□□ -0.91
RFX3-201ENST00000302303 MPP1Q00013 466 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 BNC1Q01954 994 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 PDE1CQ14123 709 aaPredicted RBP9.4□□□□□ -0.91
RFX3-201ENST00000302303 ZRANB3Q5FWF4 1079 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 PEAR1Q5VY43 1037 aaPredicted RBP9.4□□□□□ -0.91
RFX3-201ENST00000302303 CNSTQ6PJW8 725 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 LAYNQ6UX15 382 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 LPCAT2Q7L5N7 544 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 ADGRG6Q86SQ4 1221 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 HEATR4Q86WZ0 1026 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 OR13H1Q8NG92 308 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 OR2W6PQ8NHA6 318 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 ANKRD7Q92527 254 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 LPGAT1Q92604 370 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 FOXJ1Q92949 421 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 SERAC1Q96JX3 654 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 BIRC8Q96P09 236 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 VPS37BQ9H9H4 285 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 TM9SF3Q9HD45 589 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 CATSPERZQ9NTU4 200 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 VPS18Q9P253 973 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 GULP1Q9UBP9 304 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 PILRBQ9UKJ0 227 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 ST14Q9Y5Y6 855 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 SLC30A1Q9Y6M5 507 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 R4GN57 208 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 GON4LQ3T8J9 2241 aa9.4□□□□□ -0.91
RFX3-201ENST00000302303 THADAQ6YHU6 1953 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 MAP3K13O43283 966 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 DNAJC6O75061 913 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 CEACAM5P06731 702 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 NUDT17P0C025 328 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 OGNP20774 298 aaKnown RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 AKT2P31751 481 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 NUDT1P36639 197 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 POLD2P49005 469 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 CTSCP53634 463 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 ITGA9Q13797 1035 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 ZNF658BQ4V348 819 aaPredicted RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 FASTKD1Q53R41 847 aaKnown RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 ZNF470Q6ECI4 717 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 RAET1GQ6H3X3 334 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 KYAT3Q6YP21 454 aaKnown RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 Q6ZSR6 202 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 MARK2Q7KZI7 788 aaKnown RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 ARMCX6Q7L4S7 300 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 C11orf96Q7Z7L8 435 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 GALNT7Q86SF2 657 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 SPATS2Q86XZ4 545 aaKnown RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 ZNF547Q8IVP9 402 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 CLDN19Q8N6F1 224 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 RASGEF1AQ8N9B8 481 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 DCAKDQ8WVC6 231 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 UBLCP1Q8WVY7 318 aaPredicted RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 SLC44A1Q8WWI5 657 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 SCARF2Q96GP6 870 aaPredicted RBP9.39□□□□□ -0.91
RFX3-201ENST00000302303 HIC2Q96JB3 615 aa9.39□□□□□ -0.91
RFX3-201ENST00000302303 TCF12Q99081 682 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms