RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NIPSNAP2O75323 286 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 MC4RP32245 332 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 PPARGP37231 505 aaPredicted RBP21.81■■□□□ 1.08
TPM4-201ENST00000300933 RHOAP61586 193 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 UNC50Q53HI1 259 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 TPGS2Q68CL5 300 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 GK5Q6ZS86 529 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 GAREM2Q75VX8 874 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 DDI1Q8WTU0 396 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 KCNA7Q96RP8 456 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 GPR21Q99679 349 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 AARSD1Q9BTE6 412 aaKnown RBP21.81■■□□□ 1.08
TPM4-201ENST00000300933 MRPS26Q9BYN8 205 aaKnown RBP21.81■■□□□ 1.08
TPM4-201ENST00000300933 SPG21Q9NZD8 308 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 VTI1BQ9UEU0 232 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 RGSL1A5PLK6 1076 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 CDC7O00311 574 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 ATP6V1G1O75348 118 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 CKMP06732 381 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 HNRNPCP07910 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
TPM4-201ENST00000300933 SLC5A2P31639 672 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 RAB33AQ14088 237 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 ZNF678Q5SXM1 525 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 AMIGO2Q86SJ2 522 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 ZNF689Q96CS4 500 aaPredicted RBP21.8■■□□□ 1.08
TPM4-201ENST00000300933 EID2BQ96D98 161 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 DMTF1Q9Y222 760 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 TNFAIP8O95379 198 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 DNAJB1P25685 340 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 FOXA1P55317 472 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 NME5P56597 212 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 SH3BP2P78314 561 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 GEN1Q17RS7 908 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 RARS2Q5T160 578 aaKnown RBP21.8■■□□□ 1.08
TPM4-201ENST00000300933 DUS1LQ6P1R4 473 aaKnown RBP21.8■■□□□ 1.08
TPM4-201ENST00000300933 GAB3Q8WWW8 586 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 RPL10LQ96L21 214 aaKnown RBP21.8■■□□□ 1.08
TPM4-201ENST00000300933 C3orf30Q96M34 536 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 YME1L1Q96TA2 773 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 IL21Q9HBE4 155 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 GMEB1Q9Y692 573 aa21.8■■□□□ 1.08
TPM4-201ENST00000300933 GREM1O60565 184 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 IMPDH1P20839 514 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 TAF1AQ15573 450 aaPredicted RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 TAS2R42Q7RTR8 314 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 DSELQ8IZU8 1212 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 SIDT2Q8NBJ9 832 aaKnown RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 LPGAT1Q92604 370 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 CDRT15Q96T59 188 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 SEZ6LQ9BYH1 1024 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 LIN28AQ9H9Z2 209 aaKnown RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 MRPL17Q9NRX2 175 aaKnown RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 C6orf203Q9P0P8 240 aaPredicted RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 LHX3Q9UBR4 397 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 TRAF6Q9Y4K3 522 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 CNPP09543 421 aaKnown RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 THRAP10827 490 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 MTHFD2P13995 350 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 GFAPP14136 432 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 TCN1P20061 433 aaPredicted RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 LPOP22079 712 aaPredicted RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 CDKL1Q00532 357 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 TSNQ15631 228 aaKnown RBP21.79■■□□□ 1.08
TPM4-201ENST00000300933 CHST9Q7L1S5 443 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 HERC6Q8IVU3 1022 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 GPR150Q8NGU9 434 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 MIPOL1Q8TD10 442 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 SLC45A3Q96JT2 553 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 TNKS2Q9H2K2 1166 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 TMEM165Q9HC07 324 aa21.79■■□□□ 1.08
TPM4-201ENST00000300933 TANC1Q9C0D5 1861 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 STX7O15400 261 aaKnown RBP21.78■■□□□ 1.08
TPM4-201ENST00000300933 ECT2LQ008S8 904 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 CYHR1Q6ZMK1 362 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 BBS7Q8IWZ6 715 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 FAM156AQ8NDB6 213 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 OR9I1Q8NGQ6 314 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 HSPBAP1Q96EW2 488 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 TRMT2BQ96GJ1 504 aaKnown RBP21.78■■□□□ 1.08
TPM4-201ENST00000300933 RTKNQ9BST9 563 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 CCDC68Q9H2F9 335 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 UTP6Q9NYH9 597 aaKnown RBP21.78■■□□□ 1.08
TPM4-201ENST00000300933 CCDC167Q9P0B6 97 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 EVLQ9UI08 416 aaPredicted RBP21.78■■□□□ 1.08
TPM4-201ENST00000300933 ZNF510Q9Y2H8 683 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 A0A1W2PRU2 124 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 C9JVG2 144 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 TGM5O43548 720 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 CA5AP35218 305 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 DPP6P42658 865 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 RPL26P61254 145 aaKnown RBP21.78■■□□□ 1.08
TPM4-201ENST00000300933 FLOT2Q14254 428 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 LRRC26Q2I0M4 334 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 DCBLD1Q8N8Z6 715 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 TRPC4APQ8TEL6 797 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 PAWRQ96IZ0 340 aaKnown RBP21.78■■□□□ 1.08
TPM4-201ENST00000300933 BIRC8Q96P09 236 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 ZNF385DQ9H6B1 395 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 ZBTB26Q9HCK0 441 aa21.78■■□□□ 1.08
TPM4-201ENST00000300933 CIDEBQ9UHD4 219 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms