RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 GJB5O95377 273 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 IL1BP01584 269 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 POLD2P49005 469 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 LIPEQ05469 1076 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 CNPY1Q3B7I2 92 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 SLC44A2Q8IWA5 706 aaPredicted RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 ZFRQ96KR1 1074 aaKnown RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 CDK5RAP1Q96SZ6 601 aaKnown RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 C2orf49Q9BVC5 232 aaPredicted RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 KATNBL1Q9H079 304 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 Q9Y3F1 56 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 HS6ST1O60243 411 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 DEAF1O75398 565 aaPredicted RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 ECI2O75521 394 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 NTRK1P04629 796 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 SERPIND1P05546 499 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 FAM163BP0C2L3 166 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 ARRB2P32121 409 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 HTR7P34969 479 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 TECRLQ5HYJ1 363 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 TMEM74Q96NL1 305 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 TSSK3Q96PN8 268 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 RNF208Q9H0X6 261 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 CACNA2D2Q9NY47 1150 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 SPASTQ9UBP0 616 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 INVSQ9Y283 1065 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 ZNF197O14709 1029 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 CLIC3O95833 236 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 PFKPQ01813 784 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 RABL3Q5HYI8 236 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 SPESP1Q6UW49 350 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 B3GNT6Q6ZMB0 384 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 TTC30BQ8N4P2 665 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 GANCQ8TET4 914 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 SH3KBP1Q96B97 665 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 MRPL9Q9BYD2 267 aaKnown RBP13.5□□□□□ -0.25
RAB3D-201ENST00000222120 IPPKQ9H8X2 491 aa13.5□□□□□ -0.25
RAB3D-201ENST00000222120 CA12O43570 354 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 TMCC1O94876 653 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 PRAMEF1O95521 474 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 KRT6AP02538 564 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 KRT6BP04259 564 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 GKP32189 559 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 KRT6CP48668 564 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 MTPNP58546 118 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 GRB7Q14451 532 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 PARP8Q8N3A8 854 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 PHF12Q96QT6 1004 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 MAGEH1Q9H213 219 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 COMMD8Q9NX08 183 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 COMMD3-BMI1R4GMX3 469 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 ZNF623O75123 536 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 RNASEH2AO75792 299 aaKnown RBP13.49□□□□□ -0.25
RAB3D-201ENST00000222120 EOMESO95936 686 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 ADSLP30566 484 aaPredicted RBP13.49□□□□□ -0.25
RAB3D-201ENST00000222120 GDF5P43026 501 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 C16orf72Q14CZ0 275 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 RASAL3Q86YV0 1011 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 EEF1AKMT1Q8WVE0 214 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
RAB3D-201ENST00000222120 SPATA16Q9BXB7 569 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 DGCR6LQ9BY27 220 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 POLR1BQ9H9Y6 1135 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.49□□□□□ -0.25
RAB3D-201ENST00000222120 A0A1W2PQ67 120 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 MTMR11A4FU01 709 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 S1PR4O95977 384 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 SELPP16109 830 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 GJA1P17302 382 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 GABRR2P28476 465 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 SLC11A1P49279 550 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 POLR2JP52435 117 aaKnown RBP13.49□□□□□ -0.25
RAB3D-201ENST00000222120 XIAPP98170 497 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 TMEM214Q6NUQ4 689 aaKnown RBP13.49□□□□□ -0.25
RAB3D-201ENST00000222120 ZNF621Q6ZSS3 439 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 ZDHHC13Q8IUH4 622 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 NT5C3BQ969T7 300 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 C11orf84Q9BUA3 381 aaPredicted RBP13.49□□□□□ -0.25
RAB3D-201ENST00000222120 OSBPL11Q9BXB4 747 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 ZFYVE1Q9HBF4 777 aa13.49□□□□□ -0.25
RAB3D-201ENST00000222120 SYN3O14994 580 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 DGKQP52824 942 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 NR1H2P55055 460 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 ADARP55265 1226 aaKnown RBP13.48□□□□□ -0.25
RAB3D-201ENST00000222120 SERINC3Q13530 473 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 FAM219BQ5XKK7 198 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 GLYATQ6IB77 296 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 BTBD9Q96Q07 612 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 ALG2Q9H553 416 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 SH3BP4Q9P0V3 963 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 SMIM31A0A1B0GVY4 71 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 GNG14A0A1W2PPG7 69 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 VPS4BO75351 444 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 FCGR1AP12314 374 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 EPB42P16452 691 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 TPP2P29144 1249 aaPredicted RBP13.48□□□□□ -0.25
RAB3D-201ENST00000222120 CPOXP36551 454 aa13.48□□□□□ -0.25
RAB3D-201ENST00000222120 IL5RAQ01344 420 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms