RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RRP15Q9Y3B9 282 aaKnown RBP21.32■■□□□ 1
SPAST-204ENST00000621856 PCDHB1Q9Y5F3 818 aa21.32■■□□□ 1
SPAST-204ENST00000621856 GOLGA8CPA6NN73 597 aa21.32■■□□□ 1
SPAST-204ENST00000621856 E5RI56 91 aa21.32■■□□□ 1
SPAST-204ENST00000621856 NIPSNAP2O75323 286 aa21.32■■□□□ 1
SPAST-204ENST00000621856 HSPA4LO95757 839 aa21.32■■□□□ 1
SPAST-204ENST00000621856 HLA-EP13747 358 aa21.32■■□□□ 1
SPAST-204ENST00000621856 TIMP2P16035 220 aa21.32■■□□□ 1
SPAST-204ENST00000621856 ZNF7P17097 686 aaPredicted RBP21.32■■□□□ 1
SPAST-204ENST00000621856 UGT1A6P19224 532 aa21.32■■□□□ 1
SPAST-204ENST00000621856 UGT1A1P22309 533 aa21.32■■□□□ 1
SPAST-204ENST00000621856 UGT1A4P22310 534 aa21.32■■□□□ 1
SPAST-204ENST00000621856 ATP5F1P24539 256 aaPredicted RBP21.32■■□□□ 1
SPAST-204ENST00000621856 UGT1A3P35503 534 aa21.32■■□□□ 1
SPAST-204ENST00000621856 UGT1A5P35504 534 aa21.32■■□□□ 1
SPAST-204ENST00000621856 PFKPQ01813 784 aa21.32■■□□□ 1
SPAST-204ENST00000621856 SETDB1Q15047 1291 aa21.32■■□□□ 1
SPAST-204ENST00000621856 POM121L1PQ3SYA9 428 aa21.32■■□□□ 1
SPAST-204ENST00000621856 GPR33Q49SQ1 333 aa21.32■■□□□ 1
SPAST-204ENST00000621856 SFTPA1Q8IWL2 248 aa21.32■■□□□ 1
SPAST-204ENST00000621856 PHTF2Q8N3S3 785 aa21.32■■□□□ 1
SPAST-204ENST00000621856 KDM1BQ8NB78 822 aa21.32■■□□□ 1
SPAST-204ENST00000621856 FGF14Q92915 247 aa21.32■■□□□ 1
SPAST-204ENST00000621856 POMKQ9H5K3 350 aa21.32■■□□□ 1
SPAST-204ENST00000621856 ALG9Q9H6U8 611 aa21.32■■□□□ 1
SPAST-204ENST00000621856 PKD2L2Q9NZM6 624 aa21.32■■□□□ 1
SPAST-204ENST00000621856 DKK3Q9UBP4 350 aa21.32■■□□□ 1
SPAST-204ENST00000621856 LAMA3Q16787 3333 aa21.31■■□□□ 1
SPAST-204ENST00000621856 CDH23Q9H251 3354 aa21.31■■□□□ 1
SPAST-204ENST00000621856 MUC22E2RYF6 1773 aaPredicted RBP21.31■■□□□ 1
SPAST-204ENST00000621856 EDDM13A0A1B0GTR0 161 aa21.31■■□□□ 1
SPAST-204ENST00000621856 PRMT5O14744 637 aaPredicted RBP21.31■■□□□ 1
SPAST-204ENST00000621856 CD1DP15813 335 aa21.31■■□□□ 1
SPAST-204ENST00000621856 CHRM3P20309 590 aa21.31■■□□□ 1
SPAST-204ENST00000621856 ADARP55265 1226 aaKnown RBP21.31■■□□□ 1
SPAST-204ENST00000621856 ZNF234Q14588 700 aa21.31■■□□□ 1
SPAST-204ENST00000621856 ZDHHC20Q5W0Z9 365 aa21.31■■□□□ 1
SPAST-204ENST00000621856 PAQR3Q6TCH7 311 aa21.31■■□□□ 1
SPAST-204ENST00000621856 TTC7BQ86TV6 843 aa21.31■■□□□ 1
SPAST-204ENST00000621856 RBFAQ8N0V3 343 aa21.31■■□□□ 1
SPAST-204ENST00000621856 OR8D1Q8WZ84 308 aa21.31■■□□□ 1
SPAST-204ENST00000621856 CLPBQ9H078 707 aa21.31■■□□□ 1
SPAST-204ENST00000621856 P2RY12Q9H244 342 aa21.31■■□□□ 1
SPAST-204ENST00000621856 KCNK13Q9HB14 408 aa21.31■■□□□ 1
SPAST-204ENST00000621856 PCDH12Q9NPG4 1184 aa21.31■■□□□ 1
SPAST-204ENST00000621856 MED16Q9Y2X0 877 aa21.31■■□□□ 1
SPAST-204ENST00000621856 OAS3Q9Y6K5 1087 aaKnown RBP21.31■■□□□ 1
SPAST-204ENST00000621856 DENND4AQ7Z401 1863 aa21.31■■□□□ 1
SPAST-204ENST00000621856 TRBV5-4A0A0C4DH59 114 aa21.3■■□□□ 1
SPAST-204ENST00000621856 F8W8V4 182 aa21.3■■□□□ 1
SPAST-204ENST00000621856 KPNA3O00505 521 aaPredicted RBP21.3■■□□□ 1
SPAST-204ENST00000621856 ZBTB14O43829 449 aa21.3■■□□□ 1
SPAST-204ENST00000621856 PRNPP04156 253 aa21.3■■□□□ 1
SPAST-204ENST00000621856 ZNF30P17039 623 aa21.3■■□□□ 1
SPAST-204ENST00000621856 ACRV1P26436 265 aa21.3■■□□□ 1
SPAST-204ENST00000621856 HNRNPA1L2Q32P51 320 aaKnown RBP21.3■■□□□ 1
SPAST-204ENST00000621856 PTRHD1Q6GMV3 140 aaKnown RBP21.3■■□□□ 1
SPAST-204ENST00000621856 SERPINA13PQ6UXR4 307 aa21.3■■□□□ 1
SPAST-204ENST00000621856 WDR75Q8IWA0 830 aaKnown RBP21.3■■□□□ 1
SPAST-204ENST00000621856 TXNDC5Q8NBS9 432 aaKnown RBP21.3■■□□□ 1
SPAST-204ENST00000621856 PIWIL2Q8TC59 973 aaKnown RBP21.3■■□□□ 1
SPAST-204ENST00000621856 HCAR2Q8TDS4 363 aa21.3■■□□□ 1
SPAST-204ENST00000621856 CCDC126Q96EE4 140 aa21.3■■□□□ 1
SPAST-204ENST00000621856 SORT1Q99523 831 aa21.3■■□□□ 1
SPAST-204ENST00000621856 TRMT61BQ9BVS5 477 aaKnown RBP21.3■■□□□ 1
SPAST-204ENST00000621856 SARS2Q9NP81 518 aaKnown RBP21.3■■□□□ 1
SPAST-204ENST00000621856 KCNK4Q9NYG8 393 aa21.3■■□□□ 1
SPAST-204ENST00000621856 C16orf96A6NNT2 1141 aa21.29■■□□□ 1
SPAST-204ENST00000621856 ARRB2P32121 409 aa21.29■■□□□ 1
SPAST-204ENST00000621856 CA5AP35218 305 aa21.29■■□□□ 1
SPAST-204ENST00000621856 SPINT3P49223 89 aa21.29■■□□□ 1
SPAST-204ENST00000621856 NAGLUP54802 743 aa21.29■■□□□ 1
SPAST-204ENST00000621856 CTC1Q2NKJ3 1217 aa21.29■■□□□ 1
SPAST-204ENST00000621856 ITPRIPL2Q3MIP1 535 aa21.29■■□□□ 1
SPAST-204ENST00000621856 SETMARQ53H47 684 aaPredicted RBP21.29■■□□□ 1
SPAST-204ENST00000621856 UGT3A1Q6NUS8 523 aa21.29■■□□□ 1
SPAST-204ENST00000621856 CHRDL2Q6WN34 429 aa21.29■■□□□ 1
SPAST-204ENST00000621856 RFLNAQ6ZTI6 216 aa21.29■■□□□ 1
SPAST-204ENST00000621856 ISCA2Q86U28 154 aa21.29■■□□□ 1
SPAST-204ENST00000621856 FITM2Q8N6M3 262 aa21.29■■□□□ 1
SPAST-204ENST00000621856 SIDT2Q8NBJ9 832 aaKnown RBP21.29■■□□□ 1
SPAST-204ENST00000621856 KCNJ9Q92806 393 aa21.29■■□□□ 1
SPAST-204ENST00000621856 LRRC37BQ96QE4 947 aa21.29■■□□□ 1
SPAST-204ENST00000621856 GALPQ9UBC7 116 aa21.29■■□□□ 1
SPAST-204ENST00000621856 GNPTGQ9UJJ9 305 aa21.29■■□□□ 1
SPAST-204ENST00000621856 ECI2O75521 394 aa21.29■■□□□ 1
SPAST-204ENST00000621856 UBOX5O94941 541 aa21.29■■□□□ 1
SPAST-204ENST00000621856 CD9P21926 228 aa21.29■■□□□ 1
SPAST-204ENST00000621856 AQP5P55064 265 aa21.29■■□□□ 1
SPAST-204ENST00000621856 CCDC15Q0P6D6 951 aa21.29■■□□□ 1
SPAST-204ENST00000621856 RCN2Q14257 317 aa21.29■■□□□ 1
SPAST-204ENST00000621856 PREPLQ4J6C6 727 aaPredicted RBP21.29■■□□□ 1
SPAST-204ENST00000621856 LACTB2Q53H82 288 aaPredicted RBP21.29■■□□□ 1
SPAST-204ENST00000621856 C9orf64Q5T6V5 341 aa21.29■■□□□ 1
SPAST-204ENST00000621856 NXPE1Q8N323 547 aa21.29■■□□□ 1
SPAST-204ENST00000621856 NKAPQ8N5F7 415 aaKnown RBP21.29■■□□□ 1
SPAST-204ENST00000621856 CCNYL1Q8N7R7 359 aa21.29■■□□□ 1
SPAST-204ENST00000621856 GBP7Q8N8V2 638 aaPredicted RBP21.29■■□□□ 1
SPAST-204ENST00000621856 PTERQ96BW5 349 aa21.29■■□□□ 1
SPAST-204ENST00000621856 PLEKHG4BQ96PX9 1271 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms