RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 GP1BAP07359 652 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 PSMB4P28070 264 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 POLD2P49005 469 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 RPIAP49247 311 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 CXADRP78310 365 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 INSM1Q01101 510 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-228ENST00000618469 KLF1Q13351 362 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-228ENST00000618469 SIRPB2Q5JXA9 342 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 TAF8Q7Z7C8 310 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 SLC25A41Q8N5S1 370 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 TTC13Q8NBP0 860 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 EID2BQ96D98 161 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 HIC2Q96JB3 615 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 WDR24Q96S15 920 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 FAM83DQ9H4H8 585 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 GULP1Q9UBP9 304 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 SLC17A4Q9Y2C5 497 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 MGAQ8IWI9 3026 aa15.89■□□□□ 0.13
BRCA1-228ENST00000618469 TCRBV7S2A1N4TA0A589 114 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 EME2A4GXA9 379 aaPredicted RBP15.88■□□□□ 0.13
BRCA1-228ENST00000618469 RGSL1A5PLK6 1076 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 FADS2P1A8MWK0 482 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 B4DGG1 531 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 HLA-DPA1P20036 260 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 GEMP55040 296 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 DCDC1P59894 354 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 E2F1Q01094 437 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 CFHR1Q03591 330 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 ILF3Q12906 894 aaKnown RBP eCLIP15.88■□□□□ 0.13
BRCA1-228ENST00000618469 ZNF569Q5MCW4 686 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 ANKRD20A2Q5SQ80 823 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 ANKRD20A1Q5TYW2 823 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 ANKRD20A3Q5VUR7 823 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 LVRNQ6Q4G3 990 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 MARK2Q7KZI7 788 aaKnown RBP15.88■□□□□ 0.13
BRCA1-228ENST00000618469 NLRP8Q86W28 1048 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 SDR16C5Q8N3Y7 309 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 CCL4L1Q8NHW4 92 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 CCDC110Q8TBZ0 833 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 MAPK15Q8TD08 544 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 NAT6Q93015 286 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 SPATA13Q96N96 652 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 GORASP1Q9BQQ3 440 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 FICDQ9BVA6 458 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 R3HDM2Q9Y2K5 976 aaKnown RBP15.88■□□□□ 0.13
BRCA1-228ENST00000618469 TMEM98Q9Y2Y6 226 aa15.88■□□□□ 0.13
BRCA1-228ENST00000618469 LOC285095A0A1B0GVY8 99 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 J3QKU1 62 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 AURKAO14965 403 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 OPA1O60313 960 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 BRINP1O60477 761 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 ZNF189O75820 626 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-228ENST00000618469 ANXA9O76027 345 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 ASMTLO95671 621 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 FUCA1P04066 466 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 FGF1P05230 155 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 IVLP07476 585 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 SLC1A5Q15758 541 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 PERM1Q5SV97 790 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 GPR155Q7Z3F1 870 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 GLT6D1Q7Z4J2 308 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 TMC3Q7Z5M5 1100 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 GPR26Q8NDV2 337 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 FAM46DQ8NEK8 389 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 BLOC1S5Q8TDH9 187 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 COX14Q96I36 57 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 OR2M4Q96R27 311 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 SRPK1Q96SB4 655 aaKnown RBP15.87■□□□□ 0.13
BRCA1-228ENST00000618469 SPATA16Q9BXB7 569 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 GSDMCQ9BYG8 508 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 CDH19Q9H159 772 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 ABCG4Q9H172 646 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 SYNDIG1Q9H7V2 258 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 RAD18Q9NS91 495 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 NFKBIL1Q9UBC1 381 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-228ENST00000618469 PADI4Q9UM07 663 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 CLCA2Q9UQC9 943 aa15.87■□□□□ 0.13
BRCA1-228ENST00000618469 OAS3Q9Y6K5 1087 aaKnown RBP15.87■□□□□ 0.13
BRCA1-228ENST00000618469 COL27A1Q8IZC6 1860 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-228ENST00000618469 CFAP46Q8IYW2 2715 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 EPOP01588 193 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 ATP1A1P05023 1023 aaKnown RBP15.86■□□□□ 0.13
BRCA1-228ENST00000618469 BPIP17213 487 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 AK4P27144 223 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-228ENST00000618469 PRPSAP1Q14558 356 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 RPS6KA1Q15418 735 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 TAF1BQ53T94 588 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-228ENST00000618469 MEI1Q5TIA1 1274 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 SLC30A9Q6PML9 568 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 ZNF662Q6ZS27 426 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 ARHGEF18Q6ZSZ5 1173 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 GALNT13Q8IUC8 556 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 FAM71DQ8N9W8 422 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 ATG4AQ8WYN0 398 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 ZSCAN5AQ9BUG6 496 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 DPEP2Q9H4A9 486 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 TRABDQ9H4I3 376 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 BPIFA1Q9NP55 256 aa15.86■□□□□ 0.13
BRCA1-228ENST00000618469 TRNAU1APQ9NX07 287 aaKnown RBP15.86■□□□□ 0.13
BRCA1-228ENST00000618469 PPP2R2CQ9Y2T4 447 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms