RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 OVGP1Q12889 678 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 IHHQ14623 411 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 SF3A2Q15428 464 aaKnown RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 TPSAB1Q15661 275 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 AASDHQ4L235 1098 aaPredicted RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 RNF187Q5TA31 235 aaPredicted RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 TCEAL6Q6IPX3 200 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 IL27RAQ6UWB1 636 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 CAPN12Q6ZSI9 719 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 USP45Q70EL2 814 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 TAX1BP1Q86VP1 789 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 IQCHQ86VS3 1027 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 KIAA2013Q8IYS2 634 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 ANKS4BQ8N8V4 417 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 TMEM145Q8NBT3 493 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 DENND6BQ8NEG7 585 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 KLK6Q92876 244 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 TCEAL3Q969E4 200 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 TADA1Q96BN2 335 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 SLC6A18Q96N87 628 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 FCRL5Q96RD9 977 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 MCCC1Q96RQ3 725 aaPredicted RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 SMC6Q96SB8 1091 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 PAFAH2Q99487 392 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 ELAC2Q9BQ52 826 aaKnown RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 C1QTNF7Q9BXJ2 289 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 ADGRE3Q9BY15 652 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 ACTR5Q9H9F9 607 aaPredicted RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 ETNK1Q9HBU6 452 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 AASDHPPTQ9NRN7 309 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 B4GALT6Q9UBX8 382 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 CHMP2BQ9UQN3 213 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 CHKBQ9Y259 395 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 TP53BP1Q12888 1972 aaPredicted RBP8.82□□□□□ -1
SMAD4-217ENST00000611848 PCDH15Q96QU1 1955 aa8.82□□□□□ -1
SMAD4-217ENST00000611848 FRYLO94915 3013 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 PCNX2A6NKB5 2137 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 A0A0J9YYE9 177 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 A0A1W2PPM1 405 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 A0A1W2PR77 199 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 TCRBV9S1A1TA0A576 114 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ANKRD66B4E2M5 251 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 PSMD11O00231 422 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 VILLO15195 856 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 OPHN1O60890 802 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 AVILO75366 819 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 PRLP01236 227 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 EPOP01588 193 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 TRBC1P01850 177 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 PRKCGP05129 697 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ELFN1P0C7U0 828 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 C6P13671 934 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ENGP17813 658 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 NFKB1P19838 968 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 VIPR1P32241 457 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 FOXN2P32314 431 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 CSNK1EP49674 416 aaKnown RBP8.81□□□□□ -1
SMAD4-217ENST00000611848 LIG3P49916 1009 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ATXN3P54252 364 aaPredicted RBP8.81□□□□□ -1
SMAD4-217ENST00000611848 C21orf59P57076 290 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 CDK18Q07002 472 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 RALGDSQ12967 914 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 MPP3Q13368 585 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 SEMA5AQ13591 1074 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 FGL2Q14314 439 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 SPARCL1Q14515 664 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 EFTUD2Q15029 972 aaKnown RBP eCLIP8.81□□□□□ -19e-8■■■■■ 28.2
SMAD4-217ENST00000611848 AGERQ15109 404 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ANKRD20A2Q5SQ80 823 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ANKRD20A1Q5TYW2 823 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ANKRD20A3Q5VUR7 823 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 LIPIQ6XZB0 460 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 MFSD2AQ8NA29 543 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 GDAP1Q8TB36 358 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 CCDC110Q8TBZ0 833 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 SLC44A1Q8WWI5 657 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 ALKBH8Q96BT7 664 aaKnown RBP8.81□□□□□ -1
SMAD4-217ENST00000611848 SPATA13Q96N96 652 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 PPP1R2P1Q96PQ5 205 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 WRAP53Q9BUR4 548 aaKnown RBP8.81□□□□□ -1
SMAD4-217ENST00000611848 PLAC1Q9HBJ0 212 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 MLXIPLQ9NP71 852 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 FGFR1OP2Q9NVK5 253 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 KCTD5Q9NXV2 234 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 SLCO1B1Q9Y6L6 691 aa8.81□□□□□ -1
SMAD4-217ENST00000611848 TDRD6O60522 2096 aaKnown RBP8.81□□□□□ -1
SMAD4-217ENST00000611848 A0A1B0GVT2 93 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 LNP1A1A4G5 178 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 TOR1BO14657 336 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 LZTS3O60299 673 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 SPAG7O75391 227 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ZWINTO95229 277 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 METTL18O95568 372 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 MT-CYBP00156 380 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 WNT1P04628 370 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 APRTP07741 180 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 ZNF30P17039 623 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 KRT4P19013 534 aa8.8□□□□□ -1
SMAD4-217ENST00000611848 RPA3P35244 121 aaPredicted RBP8.8□□□□□ -1
SMAD4-217ENST00000611848 LIMK1P53667 647 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms