RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GPX4P36969 197 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 OR1G1P47890 313 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 WNT7BP56706 349 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ABCE1P61221 599 aaKnown RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 PUDPQ08623 228 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SLC13A2Q13183 592 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 GRB10Q13322 594 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 FLOT2Q14254 428 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SLC1A5Q15758 541 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 MGAT5BQ3V5L5 792 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 DCAF17Q5H9S7 520 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF773Q6PK81 442 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 KCTD8Q6ZWB6 473 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 NAGSQ8N159 534 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 KDF1Q8NAX2 398 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 GLIS1Q8NBF1 620 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 RNASE11Q8TAA1 199 aaKnown RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SETD6Q8TBK2 473 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SLC7A6Q92536 515 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 PROX1Q92786 737 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 GPRASP2Q96D09 838 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 KCTD14Q9BQ13 255 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 TCEAL7Q9BRU2 100 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 PI4K2AQ9BTU6 479 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 GPR63Q9BZJ6 419 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 MANSC1Q9H8J5 431 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 LRRC40Q9H9A6 602 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 NUDT15Q9NV35 164 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 DNAJC28Q9NX36 388 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 VSX1Q9NZR4 365 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 BFARQ9NZS9 450 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 MID2Q9UJV3 735 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 MAGED2Q9UNF1 606 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 A3GALT2U3KPV4 340 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 LRP6O75581 1613 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 E2F8A0AVK6 867 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 KRBOX1C9JBD0 128 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 STX7O15400 261 aaKnown RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 TREHO43280 583 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CBR3O75828 277 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ADRB1P08588 477 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SUPT20HL2P0C7V6 817 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 FGFR1P11362 822 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 TNNI1P19237 187 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CA4P22748 312 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ACOT2P49753 483 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 RGS19P49795 217 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 DSC2Q02487 901 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 FAAP100Q0VG06 881 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 GPR50Q13585 617 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CBX2Q14781 532 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ANGPT1Q15389 498 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CARTPTQ16568 116 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CA9Q16790 459 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 GPAT3Q53EU6 434 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 NHSL2Q5HYW2 709 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SLC27A4Q6P1M0 643 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SYDE1Q6ZW31 735 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SNX20Q7Z614 316 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 PRPF39Q86UA1 669 aaKnown RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 COMMD7Q86VX2 200 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ARHGEF19Q8IW93 802 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 LGI2Q8N0V4 545 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SLC24A4Q8NFF2 622 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 OR2T3Q8NH03 318 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CLHC1Q8NHS4 586 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 POC1BQ8TC44 478 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 PPP1R13LQ8WUF5 828 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CMTM5Q96DZ9 223 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 RADILQ96JH8 1075 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 C10orf90Q96M02 699 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 PCMTD1Q96MG8 357 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ZSWIM3Q96MP5 696 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 APOL4Q9BPW4 351 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 MND1Q9BWT6 205 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CCDC86Q9H6F5 360 aaKnown RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 SPACA1Q9HBV2 294 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 NECTIN3Q9NQS3 549 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 AFF4Q9UHB7 1163 aaKnown RBP8.84□□□□□ -0.99
COMMD3-215ENST00000602574 MAD2L2Q9UI95 211 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 CDH9Q9ULB4 789 aa8.84□□□□□ -0.99
COMMD3-215ENST00000602574 ROBO2Q9HCK4 1378 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 PIPSLA2A3N6 862 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 KRT87PA6NCN2 255 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 MPTX1A8MV57 137 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 TNFRSF10BO14763 440 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 PSMA7O14818 248 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 PHGDHO43175 533 aaKnown RBP8.83□□□□□ -1
COMMD3-215ENST00000602574 HTRA2O43464 458 aaPredicted RBP8.83□□□□□ -1
COMMD3-215ENST00000602574 ULK1O75385 1050 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 TNFRSF21O75509 655 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 CLUP10909 449 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 WARSP23381 471 aaKnown RBP8.83□□□□□ -1
COMMD3-215ENST00000602574 BMP8BP34820 402 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 NOS2P35228 1153 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 SLC1A3P43003 542 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 VEGFCP49767 419 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 DNA2P51530 1060 aa8.83□□□□□ -1
COMMD3-215ENST00000602574 GAD2Q05329 585 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms