RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TRBV5-4A0A0C4DH59 114 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 FAM159BA6NKW6 160 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 AGAP14A8MT82 685 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 CD3EAPO15446 510 aaKnown RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 ERLIN1O75477 346 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 PCCBP05166 539 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 ABHD2P08910 425 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 HNRNPA2B1P22626 353 aaKnown RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 IGFALSP35858 605 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 GPR1P46091 355 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 CLDN2P57739 230 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 CACNG1Q06432 222 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 NFATC2Q13469 925 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 THOC5Q13769 683 aaKnown RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 EFTUD2Q15029 972 aaKnown RBP eCLIP9.47□□□□□ -0.89
RFFL-210ENST00000582308 SETMARQ53H47 684 aaPredicted RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 ZRANB3Q5FWF4 1079 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 TEDDM1Q5T9Z0 273 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 PDPK2PQ6A1A2 396 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 RAET1GQ6H3X3 334 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 PSAPL1Q6NUJ1 521 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 SNX20Q7Z614 316 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 LDB1Q86U70 411 aaPredicted RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 ZBTB44Q8NCP5 570 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 GPR150Q8NGU9 434 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 UBLCP1Q8WVY7 318 aaPredicted RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 HSPA12BQ96MM6 686 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 MYOCQ99972 504 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 ZSCAN5AQ9BUG6 496 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 C1QTNF7Q9BXJ2 289 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 ASB8Q9H765 288 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 PPANQ9NQ55 473 aaKnown RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 IARS2Q9NSE4 1012 aaKnown RBP9.47□□□□□ -0.89
RFFL-210ENST00000582308 CATSPERZQ9NTU4 200 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 SLC17A6Q9P2U8 582 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 SLC30A1Q9Y6M5 507 aa9.47□□□□□ -0.89
RFFL-210ENST00000582308 CABIN1Q9Y6J0 2220 aa9.46□□□□□ -0.89
RFFL-210ENST00000582308 A0A087WUV0 522 aaPredicted RBP9.46□□□□□ -0.9
RFFL-210ENST00000582308 A0A1W2PPC4 97 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 POM121BA6NF01 834 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 PRAMEF26H0Y7S4 382 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 INPP4BO15327 924 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 S1PR4O95977 384 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 SHBGP04278 402 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 F7P08709 466 aaPredicted RBP9.46□□□□□ -0.9
RFFL-210ENST00000582308 ITGALP20701 1170 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 CD27P26842 260 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 MAOBP27338 520 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 TEAD1P28347 426 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 AKT2P31751 481 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 STX2P32856 288 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 PHBP35232 272 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 TRIM23P36406 574 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 NUDT1P36639 197 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 SLC1A2P43004 574 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 PTGER3P43115 390 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 NUBP1P53384 320 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 CTBP1Q13363 440 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 INPP5AQ14642 412 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 DBN1Q16643 649 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 KBTBD12Q3ZCT8 623 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 PLK5Q496M5 336 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 GPR33Q49SQ1 333 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 KHDC1Q4VXA5 237 aaKnown RBP9.46□□□□□ -0.9
RFFL-210ENST00000582308 FASTKD1Q53R41 847 aaKnown RBP9.46□□□□□ -0.9
RFFL-210ENST00000582308 ZNF789Q5FWF6 425 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 SPDYCQ5MJ68 293 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 PMS2CLQ68D20 193 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 ZNF470Q6ECI4 717 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 ZNF449Q6P9G9 518 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 FBXO38Q6PIJ6 1188 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 ADAMTSL4Q6UY14 1074 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 GCNT7Q6ZNI0 430 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 LPCAT2Q7L5N7 544 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 TAS2R42Q7RTR8 314 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 SERPINA9Q86WD7 417 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 CILP2Q8IUL8 1156 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 DENND6AQ8IWF6 608 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 CNTN4Q8IWV2 1026 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 NXPE1Q8N323 547 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 TMEM145Q8NBT3 493 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 C2CD4AQ8NCU7 369 aaPredicted RBP9.46□□□□□ -0.9
RFFL-210ENST00000582308 DENND6BQ8NEG7 585 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 C1orf216Q8TAB5 229 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 BTN2A2Q8WVV5 523 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 DNASE2BQ8WZ79 361 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 SNX19Q92543 992 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 GLYATL1Q969I3 302 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 FUBP1Q96AE4 644 aaKnown RBP9.46□□□□□ -0.9
RFFL-210ENST00000582308 CCDC97Q96F63 343 aaPredicted RBP9.46□□□□□ -0.9
RFFL-210ENST00000582308 SERAC1Q96JX3 654 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 BMFQ96LC9 184 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 VPS35Q96QK1 796 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 LGR4Q9BXB1 951 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 ACSS3Q9H6R3 686 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 ARFGAP3Q9NP61 516 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 SMOXQ9NWM0 555 aa9.46□□□□□ -0.9
RFFL-210ENST00000582308 EIF2B4Q9UI10 523 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms