RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 STRA8Q7Z7C7 330 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 DENND6AQ8IWF6 608 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 DENND6BQ8NEG7 585 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 SCAMP4Q969E2 229 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 TOE1Q96GM8 510 aaKnown RBP10.68□□□□□ -0.7
SS18-213ENST00000579640 SPACA7Q96KW9 195 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 VPS35Q96QK1 796 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 SLC17A9Q9BYT1 436 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 TPSD1Q9BZJ3 242 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 CD93Q9NPY3 652 aa10.68□□□□□ -0.7
SS18-213ENST00000579640 MARCH4Q9P2E8 410 aaPredicted RBP10.68□□□□□ -0.7
SS18-213ENST00000579640 CORO1CQ9ULV4 474 aaPredicted RBP10.68□□□□□ -0.7
SS18-213ENST00000579640 IGHV1OR15-9A0A0B4J2B8 117 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 IQANK1A0A1B0GTG1 560 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 PRR23AA6NEV1 266 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 FAM47DPA6NHR8 397 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 LAMTOR5O43504 91 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 OPA1O60313 960 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 NDUFS3O75489 264 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 KRT38O76015 456 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 ACRV1P26436 265 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 GCAP28676 217 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 CD151P48509 253 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 CTBP1Q13363 440 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 ITIH4Q14624 930 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 LRRC14Q15048 493 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 SMAD1Q15797 465 aaKnown RBP10.67□□□□□ -0.7
SS18-213ENST00000579640 ATP13A5Q4VNC0 1218 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 USP39Q53GS9 565 aaKnown RBP10.67□□□□□ -0.7
SS18-213ENST00000579640 PSAPL1Q6NUJ1 521 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 SLC36A4Q6YBV0 504 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 SERPINA9Q86WD7 417 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 NXPE1Q8N323 547 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 EPS8L3Q8TE67 593 aaKnown RBP10.67□□□□□ -0.7
SS18-213ENST00000579640 HEXDCQ8WVB3 486 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 DCAKDQ8WVC6 231 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 LENG8Q96PV6 779 aaPredicted RBP10.67□□□□□ -0.7
SS18-213ENST00000579640 RBBP8Q99708 897 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 RHOJQ9H4E5 214 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 EURLQ9NYK6 297 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 LGALS13Q9UHV8 139 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 PSAT1Q9Y617 370 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 PLXND1Q9Y4D7 1925 aa10.67□□□□□ -0.7
SS18-213ENST00000579640 TLDC2A0PJX2 215 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 LATO43561 262 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 PIAS1O75925 651 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 KRT37O76014 449 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 S1PR4O95977 384 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 AHSGP02765 367 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 MYZAPP0CAP1 466 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 ZNF7P17097 686 aaPredicted RBP10.66□□□□□ -0.7
SS18-213ENST00000579640 PTGER3P43115 390 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 GPR1P46091 355 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 POLD2P49005 469 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 LIMK2P53671 638 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 ADARP55265 1226 aaKnown RBP10.66□□□□□ -0.7
SS18-213ENST00000579640 PPP2CBP62714 309 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 PPP2CAP67775 309 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 MPP1Q00013 466 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 SEMA3AQ14563 771 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 LDLRAP1Q5SW96 308 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 KIAA0895LQ68EN5 471 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 RAET1GQ6H3X3 334 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 C1orf210Q8IVY1 113 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 PIANPQ8IYJ0 282 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 RBFAQ8N0V3 343 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 FBXL6Q8N531 539 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 GOLGA6L1Q8N7Z2 621 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 TP53I13Q8NBR0 393 aaPredicted RBP10.66□□□□□ -0.7
SS18-213ENST00000579640 BTN2A2Q8WVV5 523 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 MTBPQ96DY7 904 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 MRRFQ96E11 262 aaKnown RBP10.66□□□□□ -0.7
SS18-213ENST00000579640 MCMBPQ9BTE3 642 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 STMN4Q9H169 189 aaPredicted RBP10.66□□□□□ -0.7
SS18-213ENST00000579640 FAM96AQ9H5X1 160 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 ZDHHC3Q9NYG2 299 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 SLC17A6Q9P2U8 582 aa10.66□□□□□ -0.7
SS18-213ENST00000579640 SMIM23A6NLE4 172 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 GOLGA8CPA6NN73 597 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 CFAP99D6REC4 459 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 AGPSO00116 658 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A9O60656 530 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 NDUFS2O75306 463 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 PAK4O96013 591 aaPredicted RBP10.65□□□□□ -0.7
SS18-213ENST00000579640 SNRPAP09012 282 aaKnown RBP10.65□□□□□ -0.7
SS18-213ENST00000579640 PRSS56P0CW18 603 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 RALBP11234 206 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A6P19224 532 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A1P22309 533 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A4P22310 534 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 ATP5DP30049 168 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A3P35503 534 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 UGT1A5P35504 534 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 SLCO1A2P46721 670 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 CDKN1CP49918 316 aaPredicted RBP10.65□□□□□ -0.7
SS18-213ENST00000579640 DNAJC3Q13217 504 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 GPS2Q13227 327 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 FGL2Q14314 439 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 DBN1Q16643 649 aa10.65□□□□□ -0.7
SS18-213ENST00000579640 WSCD2Q2TBF2 565 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms