RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 LCN8Q6JVE9 175 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 OGFOD2Q6N063 350 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 RGMBQ6NW40 437 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 RSPO2Q6UXX9 243 aaPredicted RBP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 ALDH16A1Q8IZ83 802 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 MYO1HQ8N1T3 1032 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 BBS5Q8N3I7 341 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 OR7D4Q8NG98 312 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 TSPEARQ8WU66 669 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 TCF12Q99081 682 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 CIB1Q99828 191 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 RETREG1Q9H6L5 497 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 IL1RL2Q9HB29 575 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 GID8Q9NWU2 228 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 TAS2R13Q9NYV9 303 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 SEPT3Q9UH03 358 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 BTRCQ9Y297 605 aa8.9□□□□□ -0.98
NCBP3-204ENST00000574911 OAS3Q9Y6K5 1087 aaKnown RBP8.9□□□□□ -0.98
NCBP3-204ENST00000574911 UBA6A0AVT1 1052 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 H3BNC9 293 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 H3BNH8 94 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 SOCS2O14508 198 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 STX16O14662 325 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 HNRNPRO43390 633 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ACSL4O60488 711 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 H6PDO95479 791 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 CKMT2P17540 419 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 CR2P20023 1033 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 SLC6A2P23975 617 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 RGRP47804 291 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ARPP19P56211 112 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 NAA20P61599 178 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 GPR17Q13304 367 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 MAP7Q14244 749 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TAF1AQ15573 450 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TSNQ15631 228 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ZBTB49Q6ZSB9 765 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PACRGLQ8N7B6 248 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PCSK9Q8NBP7 692 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 MDGA1Q8NFP4 955 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TSPAN14Q8NG11 270 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 OR4K2Q8NGD2 314 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 LRRC58Q96CX6 371 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 B3GALT6Q96L58 329 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PSKH2Q96QS6 385 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 SEPT5Q99719 369 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TMEM79Q9BSE2 394 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 NUSAP1Q9BXS6 441 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ANKRD60Q9BZ19 345 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 GPR62Q9BZJ7 368 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PCDHA9Q9Y5H5 950 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ANKRD33BA6NCL7 494 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 CDC7O00311 574 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PLOD2O00469 737 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 INSIG1O15503 277 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 KDELR3O43731 214 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TBC1D4O60343 1298 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TLR5O60602 858 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 NDUFS3O75489 264 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PRLP01236 227 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 SLC10A3P09131 477 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ZFP36L2P47974 494 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 CDH4P55283 916 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 YBX1P67809 324 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 GRIK2Q13002 908 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 CAPRIN1Q14444 709 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PABPC1LQ4VXU2 614 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 XKR7Q5GH72 579 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 INTS11Q5TA45 600 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 IL31Q6EBC2 164 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TXNDC11Q6PKC3 985 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 SPPL2CQ8IUH8 684 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 NKAPQ8N5F7 415 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 MFSD2AQ8NA29 543 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 FUBP1Q96AE4 644 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 TMEM125Q96AQ2 219 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PPWD1Q96BP3 646 aaKnown RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 BIRC8Q96P09 236 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 HAUS8Q9BT25 410 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 CINPQ9BW66 212 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 SEMA4BQ9NPR2 832 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 PNPLA3Q9NST1 481 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 OLAHQ9NV23 265 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 AIG1Q9NVV5 245 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ACTR3BQ9P1U1 418 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 GALPQ9UBC7 116 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 UBA2Q9UBT2 640 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ARIH1Q9Y4X5 557 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 CEPT1Q9Y6K0 416 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ZFP37Q9Y6Q3 630 aaPredicted RBP8.89□□□□□ -0.99
NCBP3-204ENST00000574911 VWA8A3KMH1 1905 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 A0A1W2PP18 115 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 DHRS12A0PJE2 317 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ARHGAP10A1A4S6 786 aa8.89□□□□□ -0.99
NCBP3-204ENST00000574911 ASPDHA6ND91 283 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms