RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TDRD1Q9BXT4 1180 aaKnown RBP13.04□□□□□ -0.32
SPG7-221ENST00000569720 PCDH9Q9HC56 1237 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 LUC7LQ9NQ29 371 aaKnown RBP13.04□□□□□ -0.32
SPG7-221ENST00000569720 CTTNBP2NLQ9P2B4 639 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 ZNHIT2Q9UHR6 403 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 LCMT1Q9UIC8 334 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 RPL26L1Q9UNX3 145 aaKnown RBP13.04□□□□□ -0.32
SPG7-221ENST00000569720 CHKBQ9Y259 395 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 PLEKHM1Q9Y4G2 1056 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 ST14Q9Y5Y6 855 aa13.04□□□□□ -0.32
SPG7-221ENST00000569720 MYO18BQ8IUG5 2567 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 A0A0U1RQS6 177 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 INPP4BO15327 924 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 DUX1O43812 170 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 CLDN7O95471 211 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 KRT7P08729 469 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 SLC2A4P14672 509 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 FASLGP48023 281 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 ARSEP51690 589 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 NFATC3Q12968 1075 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 LINC00303Q3SY05 128 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 TMEM71Q6P5X7 295 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 TRIM74Q86UV6 250 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 LPCAT1Q8NF37 534 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 OR10G6Q8NH81 332 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 COX14Q96I36 57 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 AGAP2Q99490 1192 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 ASPSCR1Q9BZE9 553 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 PKD2L2Q9NZM6 624 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 VPS18Q9P253 973 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 UVRAGQ9P2Y5 699 aa13.03□□□□□ -0.32
SPG7-221ENST00000569720 TRBV23OR9-2A0A075B6M9 112 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 C1orf232A0A0U1RR37 186 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 PROSCO94903 275 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 IPO7O95373 1038 aaKnown RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 MAP3K6O95382 1288 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 HLA-DQB2P05538 268 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 PTMAP06454 111 aaKnown RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 H2AFZP0C0S5 128 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 THRAP10827 490 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 FGF3P11487 239 aaPredicted RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 RAB15P59190 212 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 ATP13A4Q4VNC1 1196 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 H2AFVQ71UI9 128 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 CHST15Q7LFX5 561 aaPredicted RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 FAM129CQ86XR2 697 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 LRRC8AQ8IWT6 810 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 CCDC13Q8IYE1 715 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 SFRP1Q8N474 314 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 IL22RA1Q8N6P7 574 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 SPC24Q8NBT2 197 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 ARRDC2Q8TBH0 407 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 SLC37A2Q8TED4 501 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 JPH3Q8WXH2 748 aaPredicted RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 CTNNBL1Q8WYA6 563 aaPredicted RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 ART4Q93070 314 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 SH3KBP1Q96B97 665 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 SMIM14Q96QK8 99 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 LYSMD1Q96S90 227 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 BAG1Q99933 345 aaPredicted RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 MLPHQ9BV36 600 aaPredicted RBP13.02□□□□□ -0.33
SPG7-221ENST00000569720 DDA1Q9BW61 102 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 FAM83DQ9H4H8 585 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 RMI1Q9H9A7 625 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 SLC39A1Q9NY26 324 aa13.02□□□□□ -0.33
SPG7-221ENST00000569720 SPTA1P02549 2419 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 TLN1Q9Y490 2541 aaKnown RBP13.01□□□□□ -0.33
SPG7-221ENST00000569720 RGSL1A5PLK6 1076 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 B4E171 279 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 ARHGAP6O43182 974 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 PRLP01236 227 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
SPG7-221ENST00000569720 MPSTP25325 297 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 CSF2RBP32927 897 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 MAN1A1P33908 653 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 TSPAN7P41732 249 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 SPINT3P49223 89 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 HHEXQ03014 270 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 KCNC4Q03721 635 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 TBR1Q16650 682 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 DCAF12Q5T6F0 453 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 SLC9B2Q86UD5 537 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 AVL9Q8NBF6 648 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 NKD1Q969G9 470 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 HDAC11Q96DB2 347 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
SPG7-221ENST00000569720 TEFMQ96QE5 360 aaKnown RBP13.01□□□□□ -0.33
SPG7-221ENST00000569720 HERPUD2Q9BSE4 406 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 ADGRE3Q9BY15 652 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.01□□□□□ -0.33
SPG7-221ENST00000569720 DEF6Q9H4E7 631 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 CLMPQ9H6B4 373 aa13.01□□□□□ -0.33
SPG7-221ENST00000569720 SARS2Q9NP81 518 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms