RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 RETSATQ6NUM9 610 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 NDUFAF2Q8N183 169 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 HDDC3Q8N4P3 179 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 OR2A12Q8NGT7 310 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 GANCQ8TET4 914 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 OR8D1Q8WZ84 308 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 BIRC7Q96CA5 298 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 MIPEPQ99797 713 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 OMDQ99983 421 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 MAGEH1Q9H213 219 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 ATP13A1Q9HD20 1204 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 EIF2B4Q9UI10 523 aaKnown RBP11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 SLCO1B1Q9Y6L6 691 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 PCDH15Q96QU1 1955 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 SPEGQ15772 3267 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 A0A1B0GTW7 788 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 WASH4PA8MWX3 477 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 CAPN14A8MX76 684 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 IGHV4-34P06331 123 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 GM2AP17900 193 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 AMPD1P23109 780 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 GRK2P25098 689 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 ETFBP38117 255 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 METAP1P53582 386 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 STX3Q13277 289 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 TRMT10BQ6PF06 316 aaKnown RBP11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 DSG4Q86SJ6 1040 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 ORAI3Q9BRQ5 295 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 MIR1-1HGQ9H1L0 117 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 C1orf21Q9H246 121 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 NOL6Q9H6R4 1146 aaKnown RBP11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 TAS2R1Q9NYW7 299 aa11.6□□□□□ -0.55
SNAPC5-208ENST00000568875 ERI2A8K979 691 aaKnown RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 F8W8V4 182 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 BCAT2O15382 392 aaPredicted RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 MTSS1O43312 755 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 CREB3O43889 395 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 KIF1CO43896 1103 aaKnown RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 CTSLP07711 333 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 SYPP08247 313 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 RPSAP08865 295 aaKnown RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 SERPINH1P50454 418 aaKnown RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 POLD3Q15054 466 aaPredicted RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 CHI3L2Q15782 390 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 SPANXN3Q5MJ09 141 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 FAM46CQ5VWP2 391 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 KIAA0895LQ68EN5 471 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 NCEH1Q6PIU2 408 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 RTL3Q8N8U3 475 aaKnown RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 TMIEQ8NEW7 156 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 OR2T34Q8NGX1 318 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 PIP4K2CQ8TBX8 421 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 ISL2Q96A47 359 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 MCUR1Q96AQ8 359 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 NAF1Q96HR8 494 aaKnown RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 ZNF570Q96NI8 536 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 EPAS1Q99814 870 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 SLC13A1Q9BZW2 595 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 CEP44Q9C0F1 390 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 NKX1-2Q9UD57 310 aaPredicted RBP11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 ACTL7AQ9Y615 435 aa11.59□□□□□ -0.55
SNAPC5-208ENST00000568875 FAM237BA0A1B0GVD1 139 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 MED19A0JLT2 244 aaPredicted RBP11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 LRRC72A6NJI9 287 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 AP3B1O00203 1094 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 RNF103O00237 685 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 PLK4O00444 970 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 KDELR3O43731 214 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 BNIP3LO60238 219 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 RAMP2O60895 175 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 SERPINA6P08185 405 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 CD27P26842 260 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 HTR7P34969 479 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 MAPK8P45983 427 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 ADPRHP54922 357 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 BNC1Q01954 994 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 DNAL1Q4LDG9 190 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 MROH9Q5TGP6 573 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 C22orf39Q6P5X5 142 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 PACS1Q6VY07 963 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 DPY19L3Q6ZPD9 716 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 WDR75Q8IWA0 830 aaKnown RBP11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 PLPP6Q8IY26 295 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 UMODL1-AS1Q8N2C9 162 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 MPP5Q8N3R9 675 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 GPATCH11Q8N954 259 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 CHST14Q8NCH0 376 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 OR14C36Q8NHC7 312 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 ISG20Q96AZ6 181 aaKnown RBP11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 TNKS2Q9H2K2 1166 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 CATSPERBQ9H7T0 1116 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 FBXO6Q9NRD1 293 aaPredicted RBP11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 NYNRINQ9P2P1 1898 aaKnown RBP11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 DOCK9Q9BZ29 2069 aa11.58□□□□□ -0.56
SNAPC5-208ENST00000568875 MAGEB16A2A368 324 aa11.57□□□□□ -0.56
SNAPC5-208ENST00000568875 C1QTNF3-AMACRE9PGA6 284 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms