RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 OR6P1Q8NGX9 317 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 PPP4R1Q8TF05 950 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 SREK1Q8WXA9 508 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 INPP5DQ92835 1189 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 DNAJC1Q96KC8 554 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 EXOC2Q96KP1 924 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 HEPHQ9BQS7 1158 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 CPEB1Q9BZB8 566 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 ATP13A3Q9H7F0 1226 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 MARCOQ9UEW3 520 aaPredicted RBP12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 HCN2Q9UL51 889 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 RUVBL2Q9Y230 463 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 DNAJC16Q9Y2G8 782 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 ANKRD36A6QL64 1941 aa12.62□□□□□ -0.39
NSMCE1-208ENST00000565070 A0A1W2PQ67 120 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 FAM170BA6NMN3 283 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 TK2O00142 265 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 STK25O00506 426 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 BNIP3LO60238 219 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 HNRNPCL1O60812 293 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CRTAMO95727 393 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 PRNPP04156 253 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 KITP10721 976 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ALOX15P16050 662 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 SERPINA4P29622 427 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ZNF140P52738 457 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 PGGT1BP53609 377 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ELF3P78545 371 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 DLG1Q12959 904 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ZNF460Q14592 562 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 KRT72Q14CN4 511 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 RBM20Q5T481 1227 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 LRRC8EQ6NSJ5 796 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 NCEH1Q6PIU2 408 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 NAPRTQ6XQN6 538 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 FSTL5Q8N475 847 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 TSPAN17Q96FV3 270 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 TBATAQ96M53 351 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ACOX2Q99424 681 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 IER2Q9BTL4 223 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 TUBB6Q9BUF5 446 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 MARCH4Q9P2E8 410 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CPSF2Q9P2I0 782 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 LNPEPQ9UIQ6 1025 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 HAO1Q9UJM8 370 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 TRIM33Q9UPN9 1127 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 SPO11Q9Y5K1 396 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CCDC162PA2VCL2 907 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CHURC1-FNTBB4DL54 471 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CCL22O00626 93 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 FCHO1O14526 889 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 MGRN1O60291 552 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 RNASEH1O60930 286 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 SOCS5O75159 536 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 WISP3O95389 354 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CBX6O95503 412 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 GOT2P00505 430 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 HLA-EP13747 358 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 HOXB2P14652 356 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 RASSF2P50749 326 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 SLC12A2P55011 1212 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 BCL2L1Q07817 233 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 CAMK2GQ13555 558 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 C9orf64Q5T6V5 341 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 LIPMQ5VYY2 423 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 MRNIPQ6NTE8 343 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ALYREFQ86V81 257 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 TXNDC5Q8NBS9 432 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 PJA1Q8NG27 643 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 NXNL1Q96CM4 212 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 SLC7A6OSQ96CW6 309 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 NDNQ99608 321 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 OLFM1Q99784 485 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 FAM96AQ9H5X1 160 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 SUDS3Q9H7L9 328 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 IGSF5Q9NSI5 407 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 NLE1Q9NVX2 485 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 EVLQ9UI08 416 aaPredicted RBP12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 MMP17Q9ULZ9 603 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 RAI2Q9Y5P3 530 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 ATG2BQ96BY7 2078 aa12.61□□□□□ -0.39
NSMCE1-208ENST00000565070 OR51F1A6NGY5 319 aa12.6□□□□□ -0.39
NSMCE1-208ENST00000565070 ZNF195O14628 629 aa12.6□□□□□ -0.39
NSMCE1-208ENST00000565070 CD3EAPO15446 510 aaKnown RBP12.6□□□□□ -0.39
NSMCE1-208ENST00000565070 OGNP20774 298 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms