RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 OR2M4Q96R27 311 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 FAM118BQ9BPY3 351 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 GPR63Q9BZJ6 419 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 FAM83DQ9H4H8 585 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 ZFYVE1Q9HBF4 777 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 TAAR2Q9P1P5 351 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 LRIT1Q9P2V4 623 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 ATXN7L1Q9ULK2 861 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 PACSIN2Q9UNF0 486 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 RPL26L1Q9UNX3 145 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 ENTPD2Q9Y5L3 495 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 RNF215Q9Y6U7 377 aa13.55□□□□□ -0.24
VPS9D1-204ENST00000565023 FADS2P1A8MWK0 482 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 TEAD1P28347 426 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 CD68P34810 354 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 ACTN2P35609 894 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 ADCY8P40145 1251 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 PPM1FP49593 454 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 WASHC5Q12768 1159 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 AMZ1Q400G9 498 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 AADACL2Q6P093 401 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 LRRC69Q6ZNQ3 347 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 BBS12Q6ZW61 710 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 ZNF765Q7L2R6 523 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 B3GNT8Q7Z7M8 397 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 GALNT13Q8IUC8 556 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 CCNJLQ8IV13 435 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 NRSN1Q8IZ57 195 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 GPBAR1Q8TDU6 330 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 TEKT5Q96M29 485 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 TRIB3Q96RU7 358 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 WDR24Q96S15 920 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 LYSMD1Q96S90 227 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 HERPUD2Q9BSE4 406 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 SPATA16Q9BXB7 569 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 CDH19Q9H159 772 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 LRRN3Q9H3W5 708 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 ZNHIT2Q9UHR6 403 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 SLC17A4Q9Y2C5 497 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 ZNF711Q9Y462 761 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 ST14Q9Y5Y6 855 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 OAS3Q9Y6K5 1087 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 SCN8AQ9UQD0 1980 aa13.54□□□□□ -0.24
VPS9D1-204ENST00000565023 A0A1W2PQM1 296 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 ECEL1O95672 775 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 FGF1P05230 155 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 PYGLP06737 847 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 IVLP07476 585 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 RBL1P28749 1068 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 ALDH4A1P30038 563 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 EIF2S3P41091 472 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 CETN2P41208 172 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 ABCG1P45844 678 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 CERCAMQ5T4B2 595 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 OGFOD3Q6PK18 319 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 CHST15Q7LFX5 561 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 GPR26Q8NDV2 337 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 IPMKQ8NFU5 416 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 HTR3CQ8WXA8 447 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 FGF11Q92914 225 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 EID2BQ96D98 161 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 QKIQ96PU8 341 aaKnown RBP eCLIP13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 POLR1BQ9H9Y6 1135 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 BPIFA1Q9NP55 256 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 TRNAU1APQ9NX07 287 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 SPO11Q9Y5K1 396 aa13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 PCYT1BQ9Y5K3 369 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-204ENST00000565023 A0A1W2PNU3 283 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 RHPN2P1A8MT19 583 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 APOC4-APOC2K7ER74 178 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 NTN3O00634 580 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 RRP8O43159 456 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 TCEA3O75764 348 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 NDST3O95803 873 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 APOC2P02655 101 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 GLB1P16278 677 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 RBMS1P29558 406 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 CHRNA4P43681 627 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 TNNT3P45378 269 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 PDX1P52945 283 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 WNT3AP56704 352 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 OR1D5P58170 312 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 OTUD4Q01804 1114 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 HLTFQ14527 1009 aaKnown RBP eCLIP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 MAP9Q49MG5 647 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 PYCR3Q53H96 274 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 ZNF569Q5MCW4 686 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 HENMT1Q5T8I9 393 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 MEI1Q5TIA1 1274 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 ZNF761Q86XN6 746 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 REXO1L1PQ8IX06 675 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 ARL14Q8N4G2 192 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 OR6C4Q8NGE1 309 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms