RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 RNF7Q9UBF6 113 aa4.69□□□□□ -1.66
LINC00560-201ENST00000564593 MORF4L1Q9UBU8 362 aa4.69□□□□□ -1.66
LINC00560-201ENST00000564593 TINAGQ9UJW2 476 aa4.69□□□□□ -1.66
LINC00560-201ENST00000564593 ACSL5Q9ULC5 683 aa4.69□□□□□ -1.66
LINC00560-201ENST00000564593 MYO6Q9UM54 1294 aa4.69□□□□□ -1.66
LINC00560-201ENST00000564593 CD8B2A6NJW9 211 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 ADAM20O43506 726 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 KCNK5O95279 499 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 CDK4P11802 303 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 IL11P20809 199 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 RRM1P23921 792 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 SUOXP51687 545 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 PNLIPRP2P54317 469 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 MAD2L1Q13257 205 aaPredicted RBP4.68□□□□□ -1.66
LINC00560-201ENST00000564593 PRPF4BQ13523 1007 aaKnown RBP4.68□□□□□ -1.66
LINC00560-201ENST00000564593 DLG2Q15700 870 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 IGSF11Q5DX21 431 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 PAPPA-AS1Q5QFB9 102 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 DCST1Q5T197 706 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 SLC30A6Q6NXT4 461 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 KRT74Q7RTS7 529 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 FJX1Q86VR8 437 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 BEST3Q8N1M1 668 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 AVL9Q8NBF6 648 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 SMG7Q92540 1137 aaKnown RBP4.68□□□□□ -1.66
LINC00560-201ENST00000564593 WASF1Q92558 559 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 FCRL4Q96PJ5 515 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 GCNAQ96QF7 691 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 ABHD1Q96SE0 405 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 APOL6Q9BWW8 343 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 TXLNGYQ9BZA5 131 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 STK39Q9UEW8 545 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 PADI1Q9ULC6 663 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 SNX9Q9Y5X1 595 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 FAM169AQ9Y6X4 670 aa4.68□□□□□ -1.66
LINC00560-201ENST00000564593 A0A1W2PR77 199 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 CPED1A4D0V7 1026 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 GLOD5A6NK44 160 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 EIF4E1BA6NMX2 242 aaKnown RBP4.67□□□□□ -1.66
LINC00560-201ENST00000564593 SOCS6O14544 535 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 SMAD9O15198 467 aaKnown RBP4.67□□□□□ -1.66
LINC00560-201ENST00000564593 ADAMDEC1O15204 470 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 SPINT2O43291 252 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 PLRG1O43660 514 aaKnown RBP4.67□□□□□ -1.66
LINC00560-201ENST00000564593 AVILO75366 819 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 HOXC6P09630 235 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 ARRB2P32121 409 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 HNRNPH2P55795 449 aaKnown RBP4.67□□□□□ -1.66
LINC00560-201ENST00000564593 ECT2LQ008S8 904 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 TMEM266Q2M3C6 531 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 C15orf59Q2T9L4 293 aaPredicted RBP4.67□□□□□ -1.66
LINC00560-201ENST00000564593 EFHC1Q5JVL4 640 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 FRG2Q64ET8 278 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 WDR73Q6P4I2 378 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 ADGRA1Q86SQ6 560 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 CCDC190Q86UF4 302 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 AACSQ86V21 672 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 MCEMP1Q8IX19 187 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 SYT2Q8N9I0 419 aaPredicted RBP4.67□□□□□ -1.66
LINC00560-201ENST00000564593 FIZ1Q96SL8 496 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 KLHL4Q9C0H6 718 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 SIL1Q9H173 461 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 NOX4Q9NPH5 578 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 PSD3Q9NYI0 1048 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 PLAGL1Q9UM63 463 aa4.67□□□□□ -1.66
LINC00560-201ENST00000564593 LOC100509620A0A075B734 347 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 LINC01553A4QN01 128 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 MAP2K7O14733 419 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 KCNJ13O60928 360 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 TRIM21P19474 475 aaKnown RBP4.66□□□□□ -1.66
LINC00560-201ENST00000564593 MMP14P50281 582 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 ZNF260Q3ZCT1 412 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 FAM69BQ5VUD6 431 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 NSUN5P2Q63ZY6 315 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 C8orf82Q6P1X6 216 aaPredicted RBP4.66□□□□□ -1.66
LINC00560-201ENST00000564593 ZNF549Q6P9A3 640 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 PCDH20Q8N6Y1 951 aaKnown RBP4.66□□□□□ -1.66
LINC00560-201ENST00000564593 KCTD6Q8NC69 237 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 CCDC191Q8NCU4 936 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 WFIKKN2Q8TEU8 576 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 CEP295NLQ96MC4 621 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 TMEM39BQ9GZU3 492 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 DNAJC18Q9H819 358 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 MRPL44Q9H9J2 332 aaKnown RBP4.66□□□□□ -1.66
LINC00560-201ENST00000564593 SLC35C2Q9NQQ7 365 aa4.66□□□□□ -1.66
LINC00560-201ENST00000564593 NFKBIL1Q9UBC1 381 aaPredicted RBP4.66□□□□□ -1.66
LINC00560-201ENST00000564593 DBNLQ9UJU6 430 aaKnown RBP4.66□□□□□ -1.66
LINC00560-201ENST00000564593 A0A0U1RQJ8 604 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 MYMKA6NI61 221 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 HS3ST1O14792 307 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 GLUD1P00367 558 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 SSTR2P30874 369 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 HOXA11P31270 313 aaPredicted RBP4.65□□□□□ -1.66
LINC00560-201ENST00000564593 GLUD2P49448 558 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.66
LINC00560-201ENST00000564593 TMF1P82094 1093 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 CRYZQ08257 329 aaKnown RBP4.65□□□□□ -1.66
LINC00560-201ENST00000564593 DDR1Q08345 913 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 TRAF2Q12933 501 aa4.65□□□□□ -1.66
LINC00560-201ENST00000564593 TNFAIP1Q13829 316 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms