RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ITGALP20701 1170 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 OGNP20774 298 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 FOXN2P32314 431 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 ACSL1P33121 698 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 CACNG1Q06432 222 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 GPR33Q49SQ1 333 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TMEM259Q4ZIN3 620 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 FASTKD1Q53R41 847 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 AARS2Q5JTZ9 985 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 HENMT1Q5T8I9 393 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3GQ6DHY5 549 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3CQ6IPX1 549 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 MRNIPQ6NTE8 343 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 FAM151BQ6UXP7 276 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 RFLNAQ6ZTI6 216 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 KIAA0408Q6ZU52 694 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 SNX20Q7Z614 316 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 CTAGE3PQ8IX95 158 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 TBC1D3Q8IZP1 549 aaPredicted RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 TRAM1L1Q8N609 369 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 ZNF398Q8TD17 642 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 NUS1Q96E22 293 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 C1QTNF2Q9BXJ5 285 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 ROPN1BQ9BZX4 212 aaPredicted RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 ABCG8Q9H221 673 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 ROPN1Q9HAT0 212 aaPredicted RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 CD93Q9NPY3 652 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 CATSPERZQ9NTU4 200 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 SLC24A2Q9UI40 661 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 CYP8B1Q9UNU6 501 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 ZFR2Q9UPR6 939 aaKnown RBP12.84□□□□□ -0.35
SPG7-209ENST00000564047 COQ6Q9Y2Z9 468 aa12.84□□□□□ -0.35
SPG7-209ENST00000564047 IGHV1OR15-9A0A0B4J2B8 117 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 CCDC163A0A0D9SF12 145 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 AGAP14A8MT82 685 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 CXorf49A8MYA2 514 aaPredicted RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 HMGB1P1B2RPK0 211 aaPredicted RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 C10orf142B7Z368 130 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 POC1B-GALNT4F8VUJ3 575 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 PRAMEF1O95521 474 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 SP9P0CG40 484 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 CD6P30203 668 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 DPTQ07507 201 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 NFATC2Q13469 925 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 ITGA9Q13797 1035 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 EFTUD2Q15029 972 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPG7-209ENST00000564047 RASA2Q15283 850 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 SMAD1Q15797 465 aaKnown RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 CHRNA6Q15825 494 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 ZNF284Q2VY69 593 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 TTMPQ5BVD1 217 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 ZRANB3Q5FWF4 1079 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 SEL1L3Q68CR1 1132 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 ZNF470Q6ECI4 717 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 CERS6Q6ZMG9 384 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 GALNT7Q86SF2 657 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 SDCCAG8Q86SQ7 713 aaPredicted RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 CROCCP2Q86T23 111 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 TRIM69Q86WT6 500 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 TDRPQ86YL5 185 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 CILP2Q8IUL8 1156 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 CNPY4Q8N129 248 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 PPM1NQ8N819 430 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 C2CD4AQ8NCU7 369 aaPredicted RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 OR2W6PQ8NHA6 318 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 SLC44A1Q8WWI5 657 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 SCAMP4Q969E2 229 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPG7-209ENST00000564047 AP2M1Q96CW1 435 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 TOE1Q96GM8 510 aaKnown RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 TCF12Q99081 682 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 PAFAH2Q99487 392 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 AGAP2Q99490 1192 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 CPNE1Q99829 537 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 DHRS4Q9BTZ2 278 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 ZSCAN5AQ9BUG6 496 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 RIOK2Q9BVS4 552 aaKnown RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 C1QTNF7Q9BXJ2 289 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 SLC17A9Q9BYT1 436 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 TPSD1Q9BZJ3 242 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 ASB8Q9H765 288 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 WSB2Q9NYS7 404 aaPredicted RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 MARCH4Q9P2E8 410 aaPredicted RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 CD84Q9UIB8 345 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 FBXO5Q9UKT4 447 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
SPG7-209ENST00000564047 FAM208BQ5VWN6 2430 aa12.83□□□□□ -0.36
SPG7-209ENST00000564047 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 ASPMQ8IZT6 3477 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 MYLKQ15746 1914 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 TRBV5-4A0A0C4DH59 114 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 FAM47DPA6NHR8 397 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 GOLGA6L10A6NI86 522 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 AXIN1O15169 862 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 PFDN6O15212 129 aa12.82□□□□□ -0.36
SPG7-209ENST00000564047 LAMTOR5O43504 91 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms