RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 PCDHB1Q9Y5F3 818 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 PRUNE2Q8WUY3 3088 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 A0A087X1B8 175 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 TRBV5-4A0A0C4DH59 114 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 PRMT5O14744 637 aaPredicted RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 RRP9O43818 475 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 RNASEH2AO75792 299 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 ESR1P03372 595 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 C2P06681 752 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 PYGLP06737 847 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 C1SP09871 688 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 RALBP11234 206 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 ACADMP11310 421 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 UGT1A6P19224 532 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 UGT1A1P22309 533 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 UGT1A4P22310 534 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 RPA3P35244 121 aaPredicted RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 UGT1A3P35503 534 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 UGT1A5P35504 534 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 SLC26A3P40879 764 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 MAGEA12P43365 314 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 KPNA2P52292 529 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 RPS14P62263 151 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 ZP2Q05996 745 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 PDE1CQ14123 709 aaPredicted RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 ITIH4Q14624 930 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 HECTD2Q5U5R9 776 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 PTRHD1Q6GMV3 140 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 PSAPL1Q6NUJ1 521 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 Q6ZVL8 140 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 ZNF765Q7L2R6 523 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 TECPR1Q7Z6L1 1165 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 TBC1D1Q86TI0 1168 aaPredicted RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 KBTBD6Q86V97 674 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 TAX1BP1Q86VP1 789 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 NLRP8Q86W28 1048 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 SERPINA9Q86WD7 417 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 SLC41A1Q8IVJ1 513 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 PIANPQ8IYJ0 282 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 UBALD2Q8IYN6 164 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 NXPE1Q8N323 547 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 TRAM1L1Q8N609 369 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 RPLP0P6Q8NHW5 317 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 MDM1Q8TC05 714 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 TCP10LQ8TDR4 215 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 HEXDCQ8WVB3 486 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 LPGAT1Q92604 370 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 AP2M1Q96CW1 435 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 SIPA1Q96FS4 1042 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 PAIP2Q9BPZ3 127 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 AARSD1Q9BTE6 412 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 WRAP53Q9BUR4 548 aaKnown RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 POPDC3Q9HBV1 291 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 SYTL2Q9HCH5 934 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
USP3-219ENST00000561326 FBXL12Q9NXK8 326 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 MMP17Q9ULZ9 603 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 PLLPQ9Y342 182 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 FADS3Q9Y5Q0 445 aa10.24□□□□□ -0.77
USP3-219ENST00000561326 ANTXRLA6NF34 631 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 AGAP14A8MT82 685 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 CFAP99D6REC4 459 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 GAPDHSO14556 408 aaPredicted RBP10.23□□□□□ -0.77
USP3-219ENST00000561326 ADAM23O75077 832 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 VPS26AO75436 327 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 RHOBTB1O94844 696 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 PCDH8O95206 1070 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 APOA4P06727 396 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 NEFHP12036 1026 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 PKMP14618 531 aaKnown RBP10.23□□□□□ -0.77
USP3-219ENST00000561326 CD72P21854 359 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 CD9P21926 228 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 ACRV1P26436 265 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 FMO4P31512 558 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 ABCG1P45844 678 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 CDKN1CP49918 316 aaPredicted RBP10.23□□□□□ -0.77
USP3-219ENST00000561326 METAP1P53582 386 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 TAS2R39P59534 338 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 GUCY1A3Q02108 690 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 RALGDSQ12967 914 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
USP3-219ENST00000561326 SEMA3AQ14563 771 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 FAM83EQ2M2I3 478 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 TSNAXIP1Q2TAA8 658 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 CCDC153Q494R4 210 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 SETMARQ53H47 684 aaPredicted RBP10.23□□□□□ -0.77
USP3-219ENST00000561326 ZNF789Q5FWF6 425 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 PIP5KL1Q5T9C9 394 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 KIAA1211LQ6NV74 962 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 KLC3Q6P597 504 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 LVRNQ6Q4G3 990 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 USP30Q70CQ3 517 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 GDAP1Q8TB36 358 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 MGARPQ8TDB4 240 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 DENND1AQ8TEH3 1009 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 SREK1Q8WXA9 508 aaKnown RBP10.23□□□□□ -0.77
USP3-219ENST00000561326 ERLEC1Q96DZ1 483 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 DTD2Q96FN9 168 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 DCUN1D1Q96GG9 259 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 COQ10AQ96MF6 247 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms