RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 EPHA8P29322 1005 aaPredicted RBP9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 ADCY8P40145 1251 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 VPS41P49754 854 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 HK3P52790 923 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 PPARDQ03181 441 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 ITGA9Q13797 1035 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 POU6F1Q14863 301 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 SUZ12Q15022 739 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 SKIDA1Q1XH10 827 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 ALG11Q2TAA5 492 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 PCID2Q5JVF3 399 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 CERCAMQ5T4B2 595 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 ANKRD22Q5VYY1 191 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 ENPP7Q6UWV6 458 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 MAATS1Q7Z4T9 603 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 PIP4P1Q86T03 277 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 CAND1Q86VP6 1230 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 HOOK3Q86VS8 718 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 OR2I1PQ8NGU4 316 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 GLYATL1Q969I3 302 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 CDKN2AIPNLQ96HQ2 116 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 KRT12Q99456 494 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 KIFC1Q9BW19 673 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 SPATA16Q9BXB7 569 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 MRM3Q9HC36 420 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 TRIM39Q9HCM9 518 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 XAB2Q9HCS7 855 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 BPIFA1Q9NP55 256 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 DLL3Q9NYJ7 618 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 BFARQ9NZS9 450 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 TMPRSS11EQ9UL52 423 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 KCTD3Q9Y597 815 aa9.56□□□□□ -0.88
RABGGTA-221ENST00000561055 UNC13CQ8NB66 2214 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TRBV5-4A0A0C4DH59 114 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 PRSS38A1L453 326 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 MAGEB16A2A368 324 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TPP1O14773 563 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 NDC80O14777 642 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 CHUKO15111 745 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TP73O15350 636 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 FLRT2O43155 660 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 BUD23O43709 281 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 VEGFDO43915 354 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 ZNF500O60304 480 aaPredicted RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 SLC25A14O95258 325 aaPredicted RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TNFP01375 233 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 JUNDP17535 347 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 CSRP1P21291 193 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 SRP54P61011 504 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 BNIP3Q12983 259 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 PEX6Q13608 980 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 PTPRCAPQ14761 206 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 MORF4L2Q15014 288 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 GPR33Q49SQ1 333 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 ATP13A5Q4VNC0 1218 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 PRAMEF14Q5SWL7 426 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TSTD2Q5T7W7 516 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 HIBCHQ6NVY1 386 aaPredicted RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 LVRNQ6Q4G3 990 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 PHACTR4Q8IZ21 702 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 SLC25A45Q8N413 288 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 DDHD1Q8NEL9 900 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 OR13C4Q8NGS5 318 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 OR13J1Q8NGT2 312 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 ZNF398Q8TD17 642 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 OR1E3Q8WZA6 343 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 SNF8Q96H20 258 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 DNAJC1Q96KC8 554 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 SERPINB12Q96P63 405 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 ERP44Q9BS26 406 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 RTKNQ9BST9 563 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 FGF22Q9HCT0 170 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TREX1Q9NSU2 369 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 PIH1D1Q9NWS0 290 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TRNAU1APQ9NX07 287 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 DNAJC28Q9NX36 388 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 KLQ9UEF7 1012 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 ASIC3Q9UHC3 531 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 TCAF1Q9Y4C2 921 aa9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 OAS3Q9Y6K5 1087 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-221ENST00000561055 IGLV3-16A0A075B6K0 115 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 NEMP2A6NFY4 417 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 SDR42E2A6NKP2 422 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 EFCAB8A8MWE9 144 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 BHMG1C9JSJ3 638 aaPredicted RBP9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 SCAMP1O15126 338 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 RAD51CO43502 376 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 NUAK1O60285 661 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 DNAJC6O75061 913 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 CBFA2T3O75081 653 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 SRP72O76094 671 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 SEC31AO94979 1220 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 PRAMEF1O95521 474 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 SLC4A1P02730 911 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 GIMD1P0DJR0 217 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 GRK6P43250 576 aa9.54□□□□□ -0.88
RABGGTA-221ENST00000561055 DRG2P55039 364 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms