RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 TEKT1Q969V4 418 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 DNAJC19Q96DA6 116 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 DAZAP1Q96EP5 407 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 SGF29Q96ES7 293 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 VPS50Q96JG6 964 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CLMNQ96JQ2 1002 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 BIRC8Q96P09 236 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 FNBP1Q96RU3 617 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TSG101Q99816 390 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SARGQ9BW04 601 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 MXD3Q9BW11 206 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PITPNM3Q9BZ71 974 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 NACAP1Q9BZK3 213 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 INO80BQ9C086 356 aaPredicted RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 CIPCQ9C0C6 399 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 NT5C3AQ9H0P0 336 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 C1orf21Q9H246 121 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 UNC45AQ9H3U1 944 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 GOLPH3Q9H4A6 298 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 FAM83DQ9H4H8 585 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PRDM16Q9HAZ2 1276 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SIX2Q9NPC8 291 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 UTP6Q9NYH9 597 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 NKIRAS1Q9NYS0 192 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TAS2R1Q9NYW7 299 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PHTF1Q9UMS5 762 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PLA2G4CQ9UP65 541 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TRAF3IP3Q9Y228 551 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 FAM50BQ9Y247 325 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SNX24Q9Y343 169 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 FADS3Q9Y5Q0 445 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SLC4A4Q9Y6R1 1079 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PSME4Q14997 1843 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TAF1LQ8IZX4 1826 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 RGPD3A6NKT7 1758 aaPredicted RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 RGPD4Q7Z3J3 1758 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SLIT2O94813 1529 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ZNFX1Q9P2E3 1918 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 NAV1Q8NEY1 1877 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ZNF804BA4D1E1 1349 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ZNF335Q9H4Z2 1342 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 IGSF9BQ9UPX0 1349 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 NUP98P52948 1817 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 TMEM247A6NEH6 219 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 DNAJC9-AS1A6NH13 148 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 TRIM64BA6NI03 449 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 MYMKA6NI61 221 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 TRIM64CA6NLI5 447 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PRRT4C9JH25 899 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ANKRD63C9JTQ0 380 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ZNF701M0R085 212 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 PSMD9O00233 223 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 FOXN3O00409 490 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 NDC80O14777 642 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 KLF11O14901 512 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 KPNA5O15131 536 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 DENRO43583 198 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 CCNT2O60583 730 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 ZNF189O75820 626 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 IDH1O75874 414 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 TM7SF2O76062 418 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 INMTO95050 263 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 IL18RAPO95256 599 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 CBX6O95503 412 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 EIF2S1P05198 315 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 UBTFL6P0CB48 400 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 MYCLP12524 364 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 MYL6BP14649 208 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PTPN2P17706 415 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PON1P27169 355 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 GCAP28676 217 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 NTSR1P30989 418 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 HTR7P34969 479 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 COILP38432 576 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 MLH1P40692 756 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PRIM2P49643 509 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 VPS41P49754 854 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 GATMP50440 423 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 GALCP54803 685 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 MTTPP55157 894 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ADARP55265 1226 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 HDAC4P56524 1084 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 SUMO2P61956 95 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 CDK16Q00536 496 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ASPHQ12797 758 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 DNAJC3Q13217 504 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 GRM1Q13255 1194 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 FHL3Q13643 280 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 LPIN1Q14693 890 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 GRM4Q14833 912 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 EXOC3L4Q17RC7 722 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 P3H1Q32P28 736 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 DNAL1Q4LDG9 190 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 TAF1BQ53T94 588 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 HSP90AA5PQ58FG0 334 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 CFAP157Q5JU67 520 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 RWDD4Q6NW29 188 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 TMEM53Q6P2H8 277 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 KLHL35Q6PF15 583 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 C1orf228Q6PIY5 440 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms