RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SPTA1P02549 2419 aa5.03□□□□□ -1.6
ATXN3-228ENST00000554592 GOLGA4Q13439 2230 aaKnown RBP5.03□□□□□ -1.6
ATXN3-228ENST00000554592 A0A1W2PR77 199 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 FAM47DPA6NHR8 397 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 LRRC72A6NJI9 287 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 K7ENP7 123 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 MAGEC1O60732 1142 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 STC2O76061 302 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 FSHBP01225 129 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 WNT1P04628 370 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 RALAP11233 206 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 TNNI1P19237 187 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 LONP1P36776 959 aaKnown RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 CCR5P51681 352 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 GALCP54803 685 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 INHBCP55103 352 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 MAP3K7CLP57077 242 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 NXPH1P58417 271 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 ASIC1P78348 528 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 FGL2Q14314 439 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 FAM214AQ32MH5 1076 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 NRN1LQ496H8 165 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 C10orf120Q5SQS8 335 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 SFMBT2Q5VUG0 894 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 AFMIDQ63HM1 303 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 TMEM215Q68D42 235 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 ZNF776Q68DI1 518 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 INO80CQ6PI98 192 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 FAM111BQ6SJ93 734 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 KDM7AQ6ZMT4 941 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 CBWD2Q8IUF1 395 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 CRYBG2Q8N1P7 616 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 CPXM2Q8N436 756 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 ZMIZ2Q8NF64 920 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 GANCQ8TET4 914 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 DDI1Q8WTU0 396 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 SORCS1Q8WY21 1168 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 SYAP1Q96A49 352 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 P2RY11Q96G91 374 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 VCPIP1Q96JH7 1222 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 ZSCAN31Q96LW9 406 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 SMOQ99835 787 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 MYOCQ99972 504 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 NAA15Q9BXJ9 866 aaKnown RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 POLR1BQ9H9Y6 1135 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 ZMAT3Q9HA38 289 aaKnown RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 EBF2Q9HAK2 575 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 NMUR1Q9HB89 426 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 PRSS16Q9NQE7 514 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 OLFML3Q9NRN5 406 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 THSD1Q9NS62 852 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 PNPOQ9NVS9 261 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 OSER1Q9NX31 292 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 FBXL12Q9NXK8 326 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 CLIC5Q9NZA1 410 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 MOCS1Q9NZB8 636 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 TBC1D7Q9P0N9 293 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 SLC23A1Q9UHI7 598 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 CLEC4EQ9ULY5 219 aa5.02□□□□□ -1.61
ATXN3-228ENST00000554592 TNRC6BQ9UPQ9 1833 aaKnown RBP5.02□□□□□ -1.61
ATXN3-228ENST00000554592 PTPRDP23468 1912 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 PTPRQQ9UMZ3 2332 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 CITO14578 2027 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 CFAP69A5D8W1 941 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 CAPN14A8MX76 684 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 F2RL2O00254 374 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 MDM4O15151 490 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 HOXA3O43365 443 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 EIF5BO60841 1220 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 RNASEH1O60930 286 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 USP12O75317 370 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 BEST1O76090 585 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 BMP15O95972 392 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 AFPP02771 609 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SLPIP03973 132 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 ATP5BP06576 529 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 DLDP09622 509 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SBK3P0C264 359 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 RAP2AP10114 183 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 DLATP10515 647 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SFTPCP11686 197 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 GP1BBP13224 206 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 TRIM21P19474 475 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 PEX2P28328 305 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 RBMS1P29558 406 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 CORO1AP31146 461 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 MYL6P60660 151 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 OVGP1Q12889 678 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 BIRC2Q13490 618 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 BMT2Q1RMZ1 405 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 ARL13BQ3SXY8 428 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 FLYWCH1Q4VC44 716 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 MPPE1Q53F39 396 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 C1QL3Q5VWW1 255 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 KIAA1614Q5VZ46 1190 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 ANKS6Q68DC2 871 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 NCEH1Q6PIU2 408 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 CHST9Q7L1S5 443 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms