RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 FBXO6Q9NRD1 293 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 TDP1Q9NUW8 608 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 TAS2R13Q9NYV9 303 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 KLHL42Q9P2K6 505 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 SLC25A13Q9UJS0 675 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 PPIL1Q9Y3C6 166 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 ARL5AQ9Y689 179 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 DNMT3AQ9Y6K1 912 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CENPFP49454 3210 aa7.29□□□□□ -1.24
ATXN3-221ENST00000553498 CCDC195A0A1B0GUA6 201 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 CCDC78A2IDD5 438 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 LCHNA4D1U4 455 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 CAPN8A6NHC0 703 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SYCE1LA8MT33 242 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 CAPN14A8MX76 684 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 WASH3PC4AMC7 463 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 MATN2O00339 956 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 FCHO1O14526 889 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 CCL16O15467 120 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SNAP91O60641 907 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 VPS26AO75436 327 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 IPO13O94829 963 aaKnown RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 POP4O95707 220 aaKnown RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 ASLP04424 464 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 RHOP08100 348 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SPATA31D3P0C874 917 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 CCDC166P0CW27 439 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 TPBGLP0DKB5 382 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 ESRRAP11474 423 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SAT1P21673 171 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 GLDCP23378 1020 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 RPS3P23396 243 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 POLR2LP62875 67 aaKnown RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 ZXDBP98169 803 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SATB1Q01826 763 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 LMAN2Q12907 356 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 TRAF2Q12933 501 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 ZRSR2Q15696 482 aaKnown RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SPRED3Q2MJR0 410 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 DNAL1Q4LDG9 190 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 PITRM1Q5JRX3 1037 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 PLPP4Q5VZY2 271 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SEL1L3Q68CR1 1132 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 GRAMD4Q6IC98 578 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 EPGNQ6UW88 154 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 ZCCHC23Q6ZST2 131 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SPATA31D4Q6ZUB0 917 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 BTLAQ7Z6A9 289 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 KIAA0907Q7Z7F0 614 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 TMPRSS6Q8IU80 811 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 MFSD6LQ8IWD5 586 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 AHI1Q8N157 1196 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 TTC30BQ8N4P2 665 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 ACVR1CQ8NER5 493 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 MDGA1Q8NFP4 955 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 STAG3L4Q8TBR4 150 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 GRIN3AQ8TCU5 1115 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SLC22A17Q8WUG5 538 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 PIH1D2Q8WWB5 315 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 LPGAT1Q92604 370 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 NXNL1Q96CM4 212 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 CMTM5Q96DZ9 223 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 L3HYPDHQ96EM0 354 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 PTCD3Q96EY7 689 aaKnown RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 PDLIM5Q96HC4 596 aaKnown RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 LRIG1Q96JA1 1093 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 OLFM1Q99784 485 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 BTBD10Q9BSF8 475 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 GPR63Q9BZJ6 419 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 DERL2Q9GZP9 239 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 BRD7Q9NPI1 651 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 MAN1C1Q9NR34 630 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 RAD18Q9NS91 495 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 KLC4Q9NSK0 619 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 IL17CQ9P0M4 197 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 CXXC1Q9P0U4 656 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-221ENST00000553498 TAGLN3Q9UI15 199 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SLC8A2Q9UPR5 921 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 ZNF711Q9Y462 761 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SPO11Q9Y5K1 396 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 SLC30A1Q9Y6M5 507 aa7.28□□□□□ -1.24
ATXN3-221ENST00000553498 A0A0J9YYE9 177 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 RGSL1A5PLK6 1076 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 HIDE1A8MVS5 230 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF195O14628 629 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ITM2AO43736 263 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 DLX3O60479 287 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 KERAO60938 352 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CLASP2O75122 1294 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 TOP3BO95985 862 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 TRBC1P01850 177 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 LMNAP02545 664 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 PDHA1P08559 390 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 SBK3P0C264 359 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 T-ENOLP0DO92 83 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 PABPC1P11940 636 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 PKMP14618 531 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms