RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 PAPD7Q5XG87 772 aaKnown RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PNCKQ6P2M8 343 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 WDR74Q6RFH5 385 aaPredicted RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 RRAGAQ7L523 313 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 MRGPRGQ86SM5 289 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PELI3Q8N2H9 469 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PPM1KQ8N3J5 372 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 LRRN4CLQ8ND94 238 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ST6GALNAC3Q8NDV1 305 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 SLC37A2Q8TED4 501 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 SEC14L1Q92503 715 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 MR1Q95460 341 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ISG20Q96AZ6 181 aaKnown RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 HDAC11Q96DB2 347 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 FAXDC2Q96IV6 333 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 EXOC2Q96KP1 924 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 GDAP1L1Q96MZ0 367 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TGM7Q96PF1 710 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 USP28Q96RU2 1077 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 SRPK1Q96SB4 655 aaKnown RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 MDFIQ99750 246 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TBC1D10AQ9BXI6 508 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TRIM8Q9BZR9 551 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TTYH3Q9C0H2 523 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 WDR26Q9H7D7 661 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 CHST11Q9NPF2 352 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ANLNQ9NQW6 1124 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PIGVQ9NUD9 493 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PDP2Q9P2J9 529 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 SH3BGRL2Q9UJC5 107 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 AJAP1Q9UKB5 411 aaPredicted RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TMEM98Q9Y2Y6 226 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 DYRK1BQ9Y463 629 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PCDHGA6Q9Y5G7 932 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ST14Q9Y5Y6 855 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 DOCK4Q8N1I0 1966 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TRGV8A0A0C4DH27 118 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 C21orf140B9A014 251 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 MAPK13O15264 365 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 KLRC4O43908 158 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 FAM155BO75949 473 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 LETM1O95202 739 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 TIAF1O95411 115 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 EML2O95834 649 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 IGSF6O95976 241 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 CEACAM5P06731 702 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 MYCLP1P12525 358 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 KRT5P13647 590 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 SNRPBP14678 240 aaKnown RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 ACPPP15309 386 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 AMD1P17707 334 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 TFE3P19532 575 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 TBXAS1P24557 533 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 RPL13P26373 211 aaKnown RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 SSTR2P30874 369 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 CA5AP35218 305 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 SULT1E1P49888 294 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 GEMIN4P57678 1058 aaKnown RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 PPP2R2AP63151 447 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 PDE1BQ01064 536 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 PLAURQ03405 335 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 TLE4Q04727 773 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 DEUP1Q05D60 604 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 EIF4EBP2Q13542 120 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 IL11RAQ14626 422 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 UGP2Q16851 508 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 C5orf22Q49AR2 442 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 EFHC1Q5JVL4 640 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 SAMD5Q5TGI4 173 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 RWDD4Q6NW29 188 aaKnown RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 CNNM4Q6P4Q7 775 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 BEND5Q7L4P6 421 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 SYVN1Q86TM6 617 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 PPP1R3BQ86XI6 285 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 HPS6Q86YV9 775 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 PLXDC1Q8IUK5 500 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 CEP97Q8IW35 865 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 CEP57L1Q8IYX8 460 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 ZADH2Q8N4Q0 377 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 ARFGAP1Q8N6T3 406 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 GOLM1Q8NBJ4 401 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 GRHL3Q8TE85 626 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 FNIP1Q8TF40 1166 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 CHTF18Q8WVB6 975 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 INPP5DQ92835 1189 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 ARHGEF2Q92974 986 aaKnown RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 KAT5Q92993 513 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 SGSM3Q96HU1 749 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 SEC16BQ96JE7 1060 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 TMX3Q96JJ7 454 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 RSRP1Q9BUV0 290 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 MLPHQ9BV36 600 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 GPR87Q9BY21 358 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 GTPBP4Q9BZE4 634 aaKnown RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 ZYG11BQ9C0D3 744 aa4.73□□□□□ -1.65
LIMS1-214ENST00000542845 STN1Q9H668 368 aaKnown RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 PHPT1Q9NRX4 125 aaPredicted RBP4.73□□□□□ -1.65
LIMS1-214ENST00000542845 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms