RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 METTL3Q86U44 580 aaKnown RBP17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 OR4L1Q8NH43 312 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 OSCP1Q8WVF1 389 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 MYO19Q96H55 970 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 ELMO2Q96JJ3 720 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 BPIFA1Q9NP55 256 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 RIMKLBQ9ULI2 386 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 NUP210Q8TEM1 1887 aaPredicted RBP17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 CD3EAPO15446 510 aaKnown RBP17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 KCNA4P22459 653 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 ASPHQ12797 758 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 CCNIQ14094 377 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 GEN1Q17RS7 908 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 INSCQ1MX18 579 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 EML3Q32P44 896 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 LIN52Q52LA3 116 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 C22orf39Q6P5X5 142 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 MAVSQ7Z434 540 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 CLEC14AQ86T13 490 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 SLC26A7Q8TE54 656 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 SORCS1Q8WY21 1168 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 SMARCD2Q92925 531 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 CDCA3Q99618 268 aaPredicted RBP17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 OMDQ99983 421 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 SLC25A13Q9UJS0 675 aa17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 G3BP2Q9UN86 482 aaKnown RBP17.02■□□□□ 0.31
PCDHB17P-201ENST00000539533 SPTBN5Q9NRC6 3674 aaKnown RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 PDLIM1O00151 329 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 HTRA2O43464 458 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 SLC35E2BP0CK96 405 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 LPOP22079 712 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 TAS2R39P59534 338 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 SNRPD1P62314 119 aaKnown RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 HYAL1Q12794 435 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 LRRC36Q1X8D7 754 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 CFAP157Q5JU67 520 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 GPR149Q86SP6 731 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 SDCCAG8Q86SQ7 713 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 GABPB2Q8TAK5 448 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 CENPKQ9BS16 269 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 PDE5AO76074 875 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 PROCP04070 461 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 SERPINE1P05121 402 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 ARSAP15289 507 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 SFT2D3Q587I9 215 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 PGM2L1Q6PCE3 622 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 SYCE2Q6PIF2 218 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 C12orf40Q86WS4 652 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 ST13P4Q8IZP2 240 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 TNS4Q8IZW8 715 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 TTC30BQ8N4P2 665 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 PAF1Q8N7H5 531 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 BPIFB1Q8TDL5 484 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 CYB5D2Q8WUJ1 264 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 NCSTNQ92542 709 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 EID2BQ96D98 161 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 ATP13A3Q9H7F0 1226 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 DZANK1Q9NVP4 752 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 POLR3BQ9NW08 1133 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 TLK1Q9UKI8 766 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 ADAMTS6Q9UKP5 1117 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 FNDC3AQ9Y2H6 1198 aaKnown RBP17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 CRYL1Q9Y2S2 319 aa17.01■□□□□ 0.31
PCDHB17P-201ENST00000539533 SORBS2O94875 1100 aaKnown RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 ADH5P11766 374 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 STMN1P16949 149 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 GRIA4P48058 902 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 IDH3AP50213 366 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 RAB10P61026 200 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 BTKQ06187 659 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 PCLAFQ15004 111 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 MYLK3Q32MK0 819 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 LPCAT4Q643R3 524 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 KIAA0907Q7Z7F0 614 aaPredicted RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 ZSWIM9Q86XI8 627 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 ACTRT2Q8TDY3 377 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 JADE3Q92613 823 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 ISG20Q96AZ6 181 aaKnown RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 OLFM1Q99784 485 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 C1QTNF1Q9BXJ1 281 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 KLHL4Q9C0H6 718 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 CATSPERZQ9NTU4 200 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 PNPOQ9NVS9 261 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 DNAJC28Q9NX36 388 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 CXorf51AA0A1B0GTR3 108 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 OTOL1A6NHN0 477 aaPredicted RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 ETS2P15036 469 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 POLR2EP19388 210 aaKnown RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 MAPK8P45983 427 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 SULT2A1Q06520 285 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 DPY19L3Q6ZPD9 716 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 Q6ZVU0 165 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 LYSMD3Q7Z3D4 306 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 AHI1Q8N157 1196 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 SPATA6LQ8N4H0 392 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 ZNF557Q8N988 423 aaPredicted RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 GPR150Q8NGU9 434 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 PPP4R1Q8TF05 950 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 TIFAQ96CG3 184 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms