RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 FEM1CQ96JP0 617 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 TFB2MQ9H5Q4 396 aaKnown RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 CLK4Q9HAZ1 481 aaKnown RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 RNF112Q9ULX5 631 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 PRG3Q9Y2Y8 225 aaPredicted RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 NCF1BA6NI72 391 aaPredicted RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 NCF1CA8MVU1 366 aaPredicted RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 DLGAP1O14490 977 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 ARPC2O15144 300 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 MTHFD1P11586 935 aaKnown RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 HSD17B1P14061 328 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 NCF1P14598 390 aaPredicted RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 IL10P22301 178 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 PSMA4P25789 261 aaKnown RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 FMO4P31512 558 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 LCP2Q13094 533 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 C10orf120Q5SQS8 335 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 IRAK1BP1Q5VVH5 260 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 FBXO39Q8N4B4 442 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 DNAJB14Q8TBM8 379 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 BRSK1Q8TDC3 778 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 GID8Q9NWU2 228 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 MARCH2Q9P0N8 246 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 PHF24Q9UPV7 400 aa13.03□□□□□ -0.32
LGR5-202ENST00000536515 HEMK1Q9Y5R4 338 aaPredicted RBP13.03□□□□□ -0.32
LGR5-202ENST00000536515 ANKRD12Q6UB98 2062 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 RNF103-CHMP3A0A140T963 221 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 SLC12A8A0AV02 714 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 KERAO60938 352 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 MATN4O95460 622 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 FASP25445 335 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 TNK2Q07912 1038 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 BNIP2Q12982 314 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 TSNQ15631 228 aaKnown RBP13.02□□□□□ -0.32
LGR5-202ENST00000536515 PARP15Q460N3 678 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 RABL3Q5HYI8 236 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 LCN8Q6JVE9 175 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 BLOC1S3Q6QNY0 202 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 SCIMPQ6UWF3 145 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 CAMK1DQ8IU85 385 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 CMTR2Q8IYT2 770 aaKnown RBP13.02□□□□□ -0.32
LGR5-202ENST00000536515 DCP1BQ8IZD4 617 aaKnown RBP13.02□□□□□ -0.32
LGR5-202ENST00000536515 ADGRG5Q8IZF4 528 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 CFAP52Q8N1V2 620 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 ZNF786Q8N393 782 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 FAM81AQ8TBF8 368 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 FBXO32Q969P5 355 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.02□□□□□ -0.322e-10■■■■■ 34
LGR5-202ENST00000536515 CDKN2AIPNLQ96HQ2 116 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 TEX37Q96LM6 180 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 ACTR3BQ9P1U1 418 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 SLC8A2Q9UPR5 921 aa13.02□□□□□ -0.32
LGR5-202ENST00000536515 CDC7O00311 574 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 INPP4BO15327 924 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 PRAMEF11O60813 436 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 ECI2O75521 394 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 BAIAP3O94812 1187 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 SEC24DO94855 1032 aaPredicted RBP13.02□□□□□ -0.33
LGR5-202ENST00000536515 IDO1P14902 403 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 HOXB8P17481 243 aaPredicted RBP13.02□□□□□ -0.33
LGR5-202ENST00000536515 CES1P23141 567 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 PRDX3P30048 256 aaKnown RBP13.02□□□□□ -0.33
LGR5-202ENST00000536515 CDK9P50750 372 aaKnown RBP13.02□□□□□ -0.33
LGR5-202ENST00000536515 HPCAP84074 193 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 NFYCQ13952 458 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 TRIP4Q15650 581 aaPredicted RBP13.02□□□□□ -0.33
LGR5-202ENST00000536515 SETMARQ53H47 684 aaPredicted RBP13.02□□□□□ -0.33
LGR5-202ENST00000536515 ALDH16A1Q8IZ83 802 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 STAG3L4Q8TBR4 150 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 HM13Q8TCT9 377 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 KIAA1191Q96A73 305 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 C8orf48Q96LL4 319 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 ADI1Q9BV57 179 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 POPDC3Q9HBV1 291 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 SLC52A3Q9NQ40 469 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 OAZ3Q9UMX2 235 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 MED16Q9Y2X0 877 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 GPR45Q9Y5Y3 372 aa13.02□□□□□ -0.33
LGR5-202ENST00000536515 BRCA2P51587 3418 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 DRGXA6NNA5 263 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 NCK1P16333 377 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 OGNP20774 298 aaKnown RBP13.01□□□□□ -0.33
LGR5-202ENST00000536515 PAX3P23760 479 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 CASP2P42575 452 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 OR1G1P47890 313 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 AGTR2P50052 363 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 CYP51A1Q16850 503 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 FUT11Q495W5 492 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 INTS11Q5TA45 600 aaKnown RBP13.01□□□□□ -0.33
LGR5-202ENST00000536515 ANKS6Q68DC2 871 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 TTC33Q6PID6 262 aaPredicted RBP13.01□□□□□ -0.33
LGR5-202ENST00000536515 ZNF598Q86UK7 904 aaKnown RBP13.01□□□□□ -0.33
LGR5-202ENST00000536515 MFSD2AQ8NA29 543 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
LGR5-202ENST00000536515 MYRFLQ96LU7 910 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 SMIM14Q96QK8 99 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 PREBQ9HCU5 417 aa13.01□□□□□ -0.33
LGR5-202ENST00000536515 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms