RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 EI24O14681 340 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 HS6ST1O60243 411 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ABCB7O75027 752 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 KATNA1O75449 491 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 SULT1C4O75897 302 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM155BO75949 473 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 EDN1P05305 212 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 UBL4AP11441 157 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 GLDCP23378 1020 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 KLRC2P26717 231 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 WEE1P30291 646 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PKLRP30613 574 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ACADSBP45954 432 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 P2RX3P56373 397 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 KCNK10P57789 538 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 YWHAHQ04917 246 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 NFYCQ13952 458 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 SULT1C3Q6IMI6 304 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 PRSS55Q6UWB4 352 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 DPY19L3Q6ZPD9 716 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 KRT73Q86Y46 540 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF280BQ86YH2 543 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CHERPQ8IWX8 916 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ATAD1Q8NBU5 361 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 SIMC1Q8NDZ2 872 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 VANGL1Q8TAA9 524 aaPredicted RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 NAT9Q9BTE0 207 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ANKRD60Q9BZ19 345 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 ARHGAP28Q9P2N2 729 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 KANSL3Q9P2N6 904 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 C3orf18Q9UK00 162 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 NUP50Q9UKX7 468 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CDH9Q9ULB4 789 aa6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 CNOT6Q9ULM6 557 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-209ENST00000532540 TEX51A0A1B0GUA7 166 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ARL5CA6NH57 179 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TPP1O14773 563 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 GNB5O14775 395 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 APOL1O14791 398 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SYNCRIPO60506 623 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 LYPLA2O95372 231 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CLIC3O95833 236 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TOP3BO95985 862 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ASS1P00966 412 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 IL1BP01584 269 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 HSMCR30P0CW71 290 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 BDNFP23560 247 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CD83Q01151 205 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 RHAGQ02094 409 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC10A6Q3KNW5 377 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ERICH5Q6P6B1 374 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 XKRXQ6PP77 449 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CHSY3Q70JA7 882 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PDZD4Q76G19 769 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SPATA2LQ8IUW3 424 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ADAM32Q8TC27 787 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TFB1MQ8WVM0 346 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TP53INP1Q96A56 240 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SENP8Q96LD8 212 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 NPLQ9BXD5 320 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 KAT8Q9H7Z6 458 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TMEM8AQ9HCN3 771 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 EGFL7Q9UHF1 273 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC39A10Q9ULF5 831 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TRAF6Q9Y4K3 522 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 UGT2A1Q9Y4X1 527 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 HSPB11Q9Y547 144 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SNX8Q9Y5X2 465 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PEX16Q9Y5Y5 336 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ATP6V1G2-DDX39BF2Z307 99 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 STX16-NPEPL1H3BU86 382 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 MED7O43513 233 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PEX14O75381 377 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SORBS2O94875 1100 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PTTG1O95997 202 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PTPN1P18031 435 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 MATN1P21941 496 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TBXAS1P24557 533 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 DCKP27707 260 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 UQCRC1P31930 480 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ARL4AP40617 200 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 OR3A3P47888 321 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PRIM2P49643 509 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 HLCSP50747 726 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 NDST1P52848 882 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 FMO1Q01740 532 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SURF1Q15526 300 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF181Q2M3W8 571 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 DCAF4L1Q3SXM0 396 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TIMM50Q3ZCQ8 353 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 FNBP1LQ5T0N5 605 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PXDC1Q5TGL8 231 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TDRD10Q5VZ19 366 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 OVOS1Q6IE37 1185 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 MZT2BQ6NZ67 158 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF767PQ75MW2 155 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SERINC5Q86VE9 423 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 RNF135Q8IUD6 432 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 EXT2Q93063 718 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms