RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MAGEA4P43358 317 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 VSNL1P62760 191 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 CRADDP78560 199 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 XIAPP98170 497 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 SEMG2Q02383 582 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 ITGA9Q13797 1035 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 CRYMQ14894 314 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 ELF2Q15723 593 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 WSCD2Q2TBF2 565 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 PLK5Q496M5 336 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 GPR33Q49SQ1 333 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 WDR45BQ5MNZ6 344 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 DENND2CQ68D51 928 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 EMBQ6PCB8 327 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 AFTPHQ6ULP2 937 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 ADAMTSL4Q6UY14 1074 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 FRMD1Q8N878 549 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 TMEM145Q8NBT3 493 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
COPB1-208ENST00000532088 GPR26Q8NDV2 337 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 OR13C4Q8NGS5 318 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 AP2M1Q96CW1 435 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 MFSD3Q96ES6 412 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 VPS35Q96QK1 796 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 KLF6Q99612 283 aaPredicted RBP12.44□□□□□ -0.42
COPB1-208ENST00000532088 ORAI3Q9BRQ5 295 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 PARD6BQ9BYG5 372 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 TXLNGYQ9BZA5 131 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 EPC1Q9H2F5 836 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 ZNF395Q9H8N7 513 aaPredicted RBP12.44□□□□□ -0.42
COPB1-208ENST00000532088 IL26Q9NPH9 171 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 CHMP2BQ9UQN3 213 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 KCTD3Q9Y597 815 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 MYLKQ15746 1914 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 PLXNA2O75051 1894 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 A0A0U1RQS6 177 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 PRR23AA6NEV1 266 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 GAPDHSO14556 408 aaPredicted RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 SRP72O76094 671 aaKnown RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 FSBPO95073 299 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 ITGALP20701 1170 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 TRIM23P36406 574 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 ARCN1P48444 511 aaKnown RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 YPEL5P62699 121 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 PRAMEP78395 509 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 OVGP1Q12889 678 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 PEX6Q13608 980 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 LONRF1Q17RB8 773 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 AARS2Q5JTZ9 985 aaKnown RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 LYPLAL1Q5VWZ2 237 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 PNCKQ6P2M8 343 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 KYAT3Q6YP21 454 aaKnown RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 UNC5AQ6ZN44 842 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 TRMT10CQ7L0Y3 403 aaKnown RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 SNX20Q7Z614 316 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 IQCHQ86VS3 1027 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 SLC41A1Q8IVJ1 513 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 IGDCC3Q8IVU1 814 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 GPR150Q8NGU9 434 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 GSDMBQ8TAX9 411 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 ZNF669Q96BR6 464 aaPredicted RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 ULK4Q96C45 1275 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 LOXL4Q96JB6 756 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 TBATAQ96M53 351 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 ZNF778Q96MU6 729 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 FUT8Q9BYC5 575 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 BPIFA1Q9NP55 256 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 SLC2A6Q9UGQ3 507 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.43□□□□□ -0.42
COPB1-208ENST00000532088 COQ6Q9Y2Z9 468 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 V9GYY5 206 aaPredicted RBP12.43□□□□□ -0.42
COPB1-208ENST00000532088 LRRK1Q38SD2 2015 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 TRPM6Q9BX84 2022 aa12.43□□□□□ -0.42
COPB1-208ENST00000532088 A0A0C4DFX4 3053 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 TRBV5-4A0A0C4DH59 114 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 MEI4A8MW99 385 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 DLL1O00548 723 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 FPGTO14772 594 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 BUD23O43709 281 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 BANF1O75531 89 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 DKK1O94907 266 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 PRAMEF1O95521 474 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 SOD1P00441 154 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 SLC4A1P02730 911 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 ABHD2P08910 425 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 MYBL2P10244 700 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 BMP2P12643 396 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 ARNTP27540 789 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 MAT2AP31153 395 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 MC4RP32245 332 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 PHBP35232 272 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 PPARGP37231 505 aaPredicted RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 ARSDP51689 593 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 PFN3P60673 137 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 RACK1P63244 317 aaKnown RBP12.42□□□□□ -0.42
COPB1-208ENST00000532088 CACNG1Q06432 222 aa12.42□□□□□ -0.42
COPB1-208ENST00000532088 ILF2Q12905 390 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms