RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 DPPA5A6NC42 116 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 TMEM202A6NGA9 273 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 TRIM64A6NGJ6 449 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 TRIM64BA6NI03 449 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SMAD9O15198 467 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SYNCRIPO60506 623 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 FMO6PO60774 539 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SLU7O95391 586 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MMP3P08254 477 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 CYP19A1P11511 503 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 TMF1P82094 1093 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 PPP2R5CQ13362 524 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 LAMB3Q13751 1172 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 CAPSQ13938 189 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 ZNF273Q14593 569 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MMEL1Q495T6 779 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 CES5AQ6NT32 575 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 TMEM71Q6P5X7 295 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 ZNF517Q6ZMY9 492 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 FAM57BQ71RH2 274 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 PIWIL3Q7Z3Z3 882 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 CREBRFQ8IUR6 639 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 LRRC57Q8N9N7 239 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 TEX45Q8NA69 505 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MSANTD4Q8NCY6 345 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MCUQ8NE86 351 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 TSPAN14Q8NG11 270 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 OR8K5Q8NH50 307 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 CFAP61Q8NHU2 1237 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MRPS27Q92552 414 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 PTP4A1Q93096 173 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MR1Q95460 341 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 HARBI1Q96MB7 349 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 DACH2Q96NX9 599 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 GBP5Q96PP8 586 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SPAG5Q96R06 1193 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 WDR83Q9BRX9 315 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SPATC1LQ9H0A9 340 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 KCNN2Q9H2S1 579 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SLCO5A1Q9H2Y9 848 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MAGIXQ9H6Y5 334 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 DBNDD1Q9H9R9 158 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SLC28A3Q9HAS3 691 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 CHCHD3Q9NX63 227 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 MTRRQ9UBK8 725 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 ACAD8Q9UKU7 415 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 AGO2Q9UKV8 859 aaKnown RBP4.57□□□□□ -1.68
CSDE1-211ENST00000525970 ERVK-11Q9UQG0 969 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 LIPGQ9Y5X9 500 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 STON1Q9Y6Q2 735 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 SLC4A4Q9Y6R1 1079 aa4.57□□□□□ -1.68
CSDE1-211ENST00000525970 A0A0G2JK05 382 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 SMTNL1A8MU46 457 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 VCYO14598 125 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 PPEF2O14830 753 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 WDR46O15213 610 aaKnown RBP4.56□□□□□ -1.68
CSDE1-211ENST00000525970 UGDHO60701 494 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 GPC4O75487 556 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 FGBP02675 491 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ICAM1P05362 532 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 CTSAP10619 480 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 FDPSP14324 419 aaKnown RBP4.56□□□□□ -1.68
CSDE1-211ENST00000525970 HOXC9P31274 260 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 RFC1P35251 1148 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-211ENST00000525970 PRCPP42785 496 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 RAB28P51157 221 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ARSEP51690 589 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 FOXG1P55316 489 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-211ENST00000525970 SREBF2Q12772 1141 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 TUBB2AQ13885 445 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ARHGEF6Q15052 776 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 LETM2Q2VYF4 491 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 DHRS7BQ6IAN0 325 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-211ENST00000525970 PET117Q6UWS5 81 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 CEP57Q86XR8 500 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ANKRD13BQ86YJ7 626 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 SFTPA2Q8IWL1 248 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 CEP57L1Q8IYX8 460 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ADGRF4Q8IZF3 695 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 HORMAD2Q8N7B1 307 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 EME1Q96AY2 570 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 HDAC11Q96DB2 347 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ZNF419Q96HQ0 510 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ZNF333Q96JL9 665 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 TMEM79Q9BSE2 394 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 WACQ9BTA9 647 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 TUBB2BQ9BVA1 445 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 NUP85Q9BW27 656 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 RTN4RQ9BZR6 473 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 B3GNT4Q9C0J1 378 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 KCNK15Q9H427 330 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 KLHL31Q9H511 634 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ANKZF1Q9H8Y5 726 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 EPB41L5Q9HCM4 733 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 PFDN4Q9NQP4 134 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 ELOVL5Q9NYP7 299 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 UBA2Q9UBT2 640 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-211ENST00000525970 RAP2CQ9Y3L5 183 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 RAI2Q9Y5P3 530 aa4.56□□□□□ -1.68
CSDE1-211ENST00000525970 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms