RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C17orf53Q8N3J3 647 aaPredicted RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 PCDH20Q8N6Y1 951 aaKnown RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 OR1J2Q8NGS2 313 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 THAP6Q8TBB0 222 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 RND1Q92730 232 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 JAKMIP2Q96AA8 810 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 LRRC59Q96AG4 307 aaKnown RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 ORAI1Q96D31 301 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 THOC3Q96J01 351 aaKnown RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 ZNF479Q96JC4 524 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 EGLN2Q96KS0 407 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 MARK4Q96L34 752 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 DACH2Q96NX9 599 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 ZNF385AQ96PM9 386 aaKnown RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 FIZ1Q96SL8 496 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 MEIS3Q99687 375 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 ZPBPQ9BS86 351 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 WACQ9BTA9 647 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 TM6SF1Q9BZW5 370 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 TMX4Q9H1E5 349 aaPredicted RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 IL25Q9H293 177 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 STK39Q9UEW8 545 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 SEC63Q9UGP8 760 aaKnown RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 LOXL2Q9Y4K0 774 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 TTLL3Q9Y4R7 772 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 A0A1W2PQ09 198 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 LACTBL1A8MY62 500 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 HS3ST1O14792 307 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 MITFO75030 526 aaPredicted RBP4.45□□□□□ -1.7
SQLE-202ENST00000518604 ICAM1P05362 532 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 HSP90AA1P07900 732 aaKnown RBP4.45□□□□□ -1.7
SQLE-202ENST00000518604 SAT1P21673 171 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 UGT1A1P22309 533 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 GCH1P30793 250 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 APOBEC1P41238 236 aaKnown RBP4.45□□□□□ -1.7
SQLE-202ENST00000518604 MFAP4P55083 255 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 ZNF155Q12901 538 aaPredicted RBP4.45□□□□□ -1.7
SQLE-202ENST00000518604 STK4Q13043 487 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 MYBPHQ13203 477 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 TNFAIP1Q13829 316 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 LCN10Q6JVE6 187 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 TRNP1Q6NT89 227 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 RGMBQ6NW40 437 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 SDCCAG8Q86SQ7 713 aaPredicted RBP4.45□□□□□ -1.7
SQLE-202ENST00000518604 NRROSQ86YC3 692 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 HM13Q8TCT9 377 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 TMED6Q8WW62 240 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 TANKQ92844 425 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 NEUROG1Q92886 237 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 SCMH1Q96GD3 660 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 GRAMD2BQ96HH9 432 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 SPRY4Q9C004 299 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 SEBOXQ9HB31 216 aaPredicted RBP4.45□□□□□ -1.7
SQLE-202ENST00000518604 NOX4Q9NPH5 578 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 CD93Q9NPY3 652 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 ZNF224Q9NZL3 707 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 C1RLQ9NZP8 487 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 RABGAP1Q9Y3P9 1069 aa4.45□□□□□ -1.7
SQLE-202ENST00000518604 TMEM184BQ9Y519 407 aaPredicted RBP4.45□□□□□ -1.7
SQLE-202ENST00000518604 LOC100509620A0A075B734 347 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 LRRC72A6NJI9 287 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 EIF4E1BA6NMX2 242 aaKnown RBP4.44□□□□□ -1.7
SQLE-202ENST00000518604 CLDN14O95500 239 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 ITGB8P26012 769 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 ACSL1P33121 698 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 MSH2P43246 934 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 SLC15A1P46059 708 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 SNX16P57768 344 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 DSCR9P59020 149 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 TAS2R38P59533 333 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 NANOS2P60321 138 aaKnown RBP4.44□□□□□ -1.7
SQLE-202ENST00000518604 ZXDBP98169 803 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 PDE1BQ01064 536 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 DDR1Q08345 913 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 KIF5AQ12840 1032 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 DLG1Q12959 904 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 FHL1Q13642 323 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 C15orf59Q2T9L4 293 aaPredicted RBP4.44□□□□□ -1.7
SQLE-202ENST00000518604 KCNT1Q5JUK3 1230 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 PAPPA-AS1Q5QFB9 102 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 C18orf63Q68DL7 685 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 PAPD4Q6PIY7 484 aaKnown RBP4.44□□□□□ -1.7
SQLE-202ENST00000518604 RHBDF2Q6PJF5 856 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 CREB3L2Q70SY1 520 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 ADHFE1Q8IWW8 467 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 POC5Q8NA72 575 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 SNRNP27Q8WVK2 155 aaKnown RBP4.44□□□□□ -1.7
SQLE-202ENST00000518604 RTP4Q96DX8 246 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 C3orf30Q96M34 536 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 QRFPRQ96P65 431 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 HIPK2Q9H2X6 1198 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 HRH4Q9H3N8 390 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 PIGMQ9H3S5 423 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 OSGEPL1Q9H4B0 414 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 GIMAP4Q9NUV9 329 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 OCIAD1Q9NX40 245 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 TRMT1Q9NXH9 659 aaKnown RBP4.44□□□□□ -1.7
SQLE-202ENST00000518604 PSD3Q9NYI0 1048 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 SIX4Q9UIU6 781 aa4.44□□□□□ -1.7
SQLE-202ENST00000518604 DBNLQ9UJU6 430 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms