RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 OXTRP30559 389 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 MAGEA6P43360 314 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 NEK2P51955 445 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 NAB1Q13506 487 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SEMA3AQ14563 771 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 CARTPTQ16568 116 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 DENND5AQ6IQ26 1287 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 RNF19BQ6ZMZ0 732 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 FKBP9P1Q75LS8 142 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 ZNF366Q8N895 744 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 ANKRD27Q96NW4 1050 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SLC9A7Q96T83 725 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 EPS8L2Q9H6S3 715 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 STARD7Q9NQZ5 370 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 GIT1Q9Y2X7 761 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SPO11Q9Y5K1 396 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SOCS2O14508 198 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 CDK14O94921 469 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 KCNH1O95259 989 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 FESP07332 822 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 STT3AP46977 705 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 UAP1L1Q3KQV9 507 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SPESP1Q6UW49 350 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 HS3ST5Q8IZT8 346 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 C2orf73Q8N5S3 287 aaPredicted RBP13.39□□□□□ -0.27
GPC1-209ENST00000495100 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 C1orf21Q9H246 121 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 MYRFQ9Y2G1 1151 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 A0A087X1B8 175 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 C7orf72A4D263 438 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 SYNDIG1LA6NDD5 238 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 TOMM70O94826 608 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 CPSF4O95639 269 aaKnown RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 C1RP00736 705 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 CAPN1P07384 714 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 CLCN5P51795 746 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 BFSP2Q13515 415 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 GSTA3Q16772 222 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 XKR5Q6UX68 686 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 RETREG3Q86VR2 466 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 CDKN2AIPNLQ96HQ2 116 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 SIKE1Q9BRV8 207 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 C1orf232A0A0U1RR37 186 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 FGF10O15520 208 aaPredicted RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 STAU1O95793 577 aaKnown RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 ALBP02768 609 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 CCNG1P51959 295 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 LIPEQ05469 1076 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 SQLEQ14534 574 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 PTGR1Q14914 329 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 MAPK11Q15759 364 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 NFE2Q16621 373 aaPredicted RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 PIGGQ5H8A4 983 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 GPR141Q7Z602 305 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 PIANPQ8IYJ0 282 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 LMNTD1Q8N9Z9 388 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 ELMO1Q92556 727 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 ASB8Q9H765 288 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 WDR70Q9NW82 654 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 MBLAC1A4D2B0 266 aaPredicted RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 ECI2O75521 394 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 CAPN3P20807 821 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 PCSK6P29122 969 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 STXBP5Q5T5C0 1151 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 METTL21CQ5VZV1 264 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 KCTD11Q693B1 232 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 RANBP10Q6VN20 620 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 ISCA2Q86U28 154 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 TMEM173Q86WV6 379 aaPredicted RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 PHACTR4Q8IZ21 702 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 ARHGAP18Q8N392 663 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 TRPV1Q8NER1 839 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 OR13J1Q8NGT2 312 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 SLC30A3Q99726 388 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 ROGDIQ9GZN7 287 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 PREBQ9HCU5 417 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 IGSF5Q9NSI5 407 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 OLA1Q9NTK5 396 aaKnown RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 AGO1Q9UL18 857 aaKnown RBP13.38□□□□□ -0.27
GPC1-209ENST00000495100 RAI2Q9Y5P3 530 aa13.38□□□□□ -0.27
GPC1-209ENST00000495100 FBP2O00757 339 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 H2AFYO75367 372 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 ALDOCP09972 364 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 TACR2P21452 398 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 CORO1AP31146 461 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 SLC11A2P49281 568 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 FAM189BP81408 668 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 MYBPC1Q00872 1141 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 UNC50Q53HI1 259 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 TECRLQ5HYJ1 363 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 TAS1R1Q7RTX1 841 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 ARHGAP22Q7Z5H3 698 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms