RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PKP3Q9Y446 797 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 ARL5AQ9Y689 179 aa11.53□□□□□ -0.56
CTSA-209ENST00000493522 GOLGA4Q13439 2230 aaKnown RBP11.52□□□□□ -0.56
CTSA-209ENST00000493522 COL5A1P20908 1838 aaPredicted RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 RGSL1A5PLK6 1076 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 FAM149AA5PLN7 773 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 C2orf81A6NN90 581 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 TOR1BO14657 336 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 INPP4BO15327 924 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 STX7O15400 261 aaKnown RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 SUN1O94901 812 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 CRTAMO95727 393 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 PYGLP06737 847 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 MYCLP1P12525 358 aaPredicted RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 BPIP17213 487 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 TPH1P17752 444 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 TPSB2P20231 275 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 HMGCLP35914 325 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 SPAM1P38567 509 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 KIAA1024LP59773 190 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 DCDC1P59894 354 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 CDK3Q00526 305 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 DR1Q01658 176 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 CKAP4Q07065 602 aaKnown RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 DPTQ07507 201 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 C2orf54Q08AI8 447 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 PTK6Q13882 451 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 FZD2Q14332 565 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 POU6F1Q14863 301 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 TAF1AQ15573 450 aaPredicted RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 TPSAB1Q15661 275 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 ZNF542PQ5EBM4 170 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 HENMT1Q5T8I9 393 aaKnown RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 DOK6Q6PKX4 331 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 DHRS13Q6UX07 377 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 MARCH9Q86YJ5 346 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 RAVER1Q8IY67 606 aaKnown RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 GPR26Q8NDV2 337 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 FUBP1Q96AE4 644 aaKnown RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 EID2BQ96D98 161 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 WDR92Q96MX6 357 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 KRT12Q99456 494 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 AGAP2Q99490 1192 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 ELF4Q99607 663 aaPredicted RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 ERVMER34-1Q9H9K5 563 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 ARNT2Q9HBZ2 717 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 NFKBIL1Q9UBC1 381 aaPredicted RBP11.52□□□□□ -0.57
CTSA-209ENST00000493522 KLQ9UEF7 1012 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 PCYOX1Q9UHG3 505 aa11.52□□□□□ -0.57
CTSA-209ENST00000493522 ARHGEF17Q96PE2 2063 aaPredicted RBP11.51□□□□□ -0.57
CTSA-209ENST00000493522 HELZ2Q9BYK8 2649 aaKnown RBP11.51□□□□□ -0.57
CTSA-209ENST00000493522 SPTY2D1-AS1A0A0U1RR47 76 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 A0A1B0GTQ1 180 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 FADS2P1A8MWK0 482 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 H3BM21 787 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 YKT6O15498 198 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 SDC3O75056 442 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 SOD1P00441 154 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 TUBB4AP04350 444 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 CDK4P11802 303 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 LPOP22079 712 aaPredicted RBP11.51□□□□□ -0.57
CTSA-209ENST00000493522 KELP23276 732 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 TEAD1P28347 426 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 EPHA8P29322 1005 aaPredicted RBP11.51□□□□□ -0.57
CTSA-209ENST00000493522 GRIA1P42261 906 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 ABCG1P45844 678 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 PDE1BQ01064 536 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 KCNJ11Q14654 390 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 PTPRCAPQ14761 206 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 ENPP7Q6UWV6 458 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 FAM151BQ6UXP7 276 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 ADAMTSL4Q6UY14 1074 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 TRIM74Q86UV6 250 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 TMPRSS12Q86WS5 348 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 PHACTR4Q8IZ21 702 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 OR4K2Q8NGD2 314 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 BRSK1Q8TDC3 778 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 SLCO2A1Q92959 643 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 NXPE2Q96DL1 559 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 DCBLD2Q96PD2 775 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 BBC3Q96PG8 261 aaPredicted RBP11.51□□□□□ -0.57
CTSA-209ENST00000493522 PLEKHG4BQ96PX9 1271 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 TRIM51Q9BSJ1 452 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 ZSCAN5AQ9BUG6 496 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 CDH19Q9H159 772 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
CTSA-209ENST00000493522 CASS4Q9NQ75 786 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 IL17CQ9P0M4 197 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 MOSPD1Q9UJG1 213 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 CDC23Q9UJX2 597 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 NEU2Q9Y3R4 380 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 KCTD3Q9Y597 815 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 PCDHGA1Q9Y5H4 931 aa11.51□□□□□ -0.57
CTSA-209ENST00000493522 ARID1BQ8NFD5 2236 aaPredicted RBP11.51□□□□□ -0.57
CTSA-209ENST00000493522 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms