RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CREB5Q02930 508 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 PEX6Q13608 980 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 INPP5AQ14642 412 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 STAT4Q14765 748 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 SPANXN3Q5MJ09 141 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 WDR45BQ5MNZ6 344 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 ZDHHC20Q5W0Z9 365 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 WDR93Q6P2C0 686 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 PNCKQ6P2M8 343 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 CEP128Q6ZU80 1094 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 ZNF765Q7L2R6 523 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 TAS2R42Q7RTR8 314 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 PTAR1Q7Z6K3 402 aaPredicted RBP17.09■□□□□ 0.33
LIME1-208ENST00000493265 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
LIME1-208ENST00000493265 ASB12Q8WXK4 309 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 CENPTQ96BT3 561 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 LENG8Q96PV6 779 aaPredicted RBP17.09■□□□□ 0.33
LIME1-208ENST00000493265 PLEKHG4BQ96PX9 1271 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 KLF6Q99612 283 aaPredicted RBP17.09■□□□□ 0.33
LIME1-208ENST00000493265 TSPYL1Q9H0U9 437 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 ARRDC1-AS1Q9H2J1 176 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 ASB8Q9H765 288 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 PPANQ9NQ55 473 aaKnown RBP17.09■□□□□ 0.33
LIME1-208ENST00000493265 C20orf96Q9NUD7 363 aaPredicted RBP17.09■□□□□ 0.33
LIME1-208ENST00000493265 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 RIMKLBQ9ULI2 386 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 DMTF1Q9Y222 760 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 CEP192Q8TEP8 1941 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 THADAQ6YHU6 1953 aa17.09■□□□□ 0.33
LIME1-208ENST00000493265 CNOT1A5YKK6 2376 aaKnown RBP17.08■□□□□ 0.33
LIME1-208ENST00000493265 PLXNA2O75051 1894 aa17.08■□□□□ 0.33
LIME1-208ENST00000493265 POM121BA6NF01 834 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 FADS2P1A8MWK0 482 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 PRAMEF26H0Y7S4 382 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 GAPDHSO14556 408 aaPredicted RBP17.08■□□□□ 0.32
LIME1-208ENST00000493265 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.32
LIME1-208ENST00000493265 TTC4O95801 387 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 SSTR1P30872 391 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 CDKN1CP49918 316 aaPredicted RBP17.08■□□□□ 0.32
LIME1-208ENST00000493265 DCDC1P59894 354 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 XIAPP98170 497 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 AGERQ15109 404 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 KYNUQ16719 465 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 LONRF1Q17RB8 773 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 ATP13A5Q4VNC0 1218 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 HENMT1Q5T8I9 393 aaKnown RBP17.08■□□□□ 0.32
LIME1-208ENST00000493265 AFTPHQ6ULP2 937 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 TMEM135Q86UB9 458 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 CCNJLQ8IV13 435 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 TRAM1L1Q8N609 369 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 PNPLA1Q8N8W4 532 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 MYRIPQ8NFW9 859 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 OR4L1Q8NH43 312 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 GDAP1Q8TB36 358 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 ZNF398Q8TD17 642 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 ORAI3Q9BRQ5 295 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 PHACTR1Q9C0D0 580 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 KCTD5Q9NXV2 234 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 CRLS1Q9UJA2 301 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 OR1A2Q9Y585 309 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 ABCA7Q8IZY2 2146 aa17.08■□□□□ 0.32
LIME1-208ENST00000493265 USP24Q9UPU5 2620 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 ZCWPW2A0A1B0GU75 182 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 C10orf142B7Z368 130 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 FOXD2O60548 495 aaPredicted RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 ERVK-10P10266 1014 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 ITGALP20701 1170 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 CA5AP35218 305 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 NUDT1P36639 197 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 ACVR1Q04771 509 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 DPTQ07507 201 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 THOC5Q13769 683 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 SLMAPQ14BN4 828 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 FASTKD1Q53R41 847 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 UBAP2Q5T6F2 1119 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 KIAA0930Q6ICG6 404 aaPredicted RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 LAYNQ6UX15 382 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 GCNT7Q6ZNI0 430 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 TRIM74Q86UV6 250 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 HEATR4Q86WZ0 1026 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 RAVER1Q8IY67 606 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 EIF1ADQ8N9N8 165 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 DENND6BQ8NEG7 585 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 PIGKQ92643 395 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 ZC3H10Q96K80 434 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 ZSCAN5AQ9BUG6 496 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 CDH19Q9H159 772 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 CDC42EP4Q9H3Q1 356 aaKnown RBP17.07■□□□□ 0.32
LIME1-208ENST00000493265 PLAC1Q9HBJ0 212 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 RXFP3Q9NSD7 469 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 FAM169AQ9Y6X4 670 aa17.07■□□□□ 0.32
LIME1-208ENST00000493265 EPN2O95208 641 aa17.06■□□□□ 0.32
LIME1-208ENST00000493265 ACSL3O95573 720 aa17.06■□□□□ 0.32
LIME1-208ENST00000493265 SOD1P00441 154 aa17.06■□□□□ 0.32
LIME1-208ENST00000493265 F7P08709 466 aaPredicted RBP17.06■□□□□ 0.32
LIME1-208ENST00000493265 TSHRP16473 764 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms