RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 AFF3P51826 1226 aaKnown RBP15.98■□□□□ 0.15
CLIC4-203ENST00000489758 VSNL1P62760 191 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 PRAMEP78395 509 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 CDK3Q00526 305 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 FAM153CQ494X1 144 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 SPANXN3Q5MJ09 141 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 LAIR1Q6GTX8 287 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 WDR93Q6P2C0 686 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 AFTPHQ6ULP2 937 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 CCNI2Q6ZMN8 369 aaPredicted RBP15.98■□□□□ 0.15
CLIC4-203ENST00000489758 Q6ZSR6 202 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 IQCHQ86VS3 1027 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 HEATR4Q86WZ0 1026 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 PIANPQ8IYJ0 282 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 SLC22A18ASQ8N1D0 253 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 FAM174AQ8TBP5 190 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 ZNF398Q8TD17 642 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 BTN2A2Q8WVV5 523 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 GLYATL1Q969I3 302 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 CFAP36Q96G28 342 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 COX14Q96I36 57 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 VPS35Q96QK1 796 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 APOOQ9BUR5 198 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 LGR4Q9BXB1 951 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 WDR26Q9H7D7 661 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 PCDHGA5Q9Y5G8 931 aa15.98■□□□□ 0.15
CLIC4-203ENST00000489758 TRBV5-4A0A0C4DH59 114 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 TOR1BO14657 336 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 VILLO15195 856 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 INPP4BO15327 924 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 DPP6P42658 865 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 CSNK1EP49674 416 aaKnown RBP15.97■□□□□ 0.15
CLIC4-203ENST00000489758 KIAA1024LP59773 190 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 YPEL5P62699 121 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 CACNG1Q06432 222 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 OVGP1Q12889 678 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 ITGA9Q13797 1035 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 FRG1Q14331 258 aaKnown RBP15.97■□□□□ 0.15
CLIC4-203ENST00000489758 SEMA3AQ14563 771 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 PSAPL1Q6NUJ1 521 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 SNX20Q7Z614 316 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 PTAR1Q7Z6K3 402 aaPredicted RBP15.97■□□□□ 0.15
CLIC4-203ENST00000489758 UNC5BQ8IZJ1 945 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 GPR161Q8N6U8 529 aaKnown RBP15.97■□□□□ 0.15
CLIC4-203ENST00000489758 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLIC4-203ENST00000489758 OR6P1Q8NGX9 317 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 PYROXD1Q8WU10 500 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 HIC2Q96JB3 615 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 C9orf72Q96LT7 481 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 TSPYL1Q9H0U9 437 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 FAM96AQ9H5X1 160 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 ASB8Q9H765 288 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 IL1RAPL1Q9NZN1 696 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 MARCH4Q9P2E8 410 aaPredicted RBP15.97■□□□□ 0.15
CLIC4-203ENST00000489758 SUSD2Q9UGT4 822 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 RAB23Q9ULC3 237 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 SLC30A1Q9Y6M5 507 aa15.97■□□□□ 0.15
CLIC4-203ENST00000489758 MYLKQ15746 1914 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 PRR5-ARHGAP8B1AHC4 643 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 PROB1E7EW31 1015 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 TLR4O00206 839 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 THEGLP0DJG4 465 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 MYCLP1P12525 358 aaPredicted RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 GNSP15586 552 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 PAMP19021 973 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 ITGALP20701 1170 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 NXPH1P58417 271 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 GPX6P59796 221 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 BNC1Q01954 994 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 NFATC4Q14934 902 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 SMAD1Q15797 465 aaKnown RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 LONRF1Q17RB8 773 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 GPR33Q49SQ1 333 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 KHDC1Q4VXA5 237 aaKnown RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 ZRANB3Q5FWF4 1079 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 UBAP2Q5T6F2 1119 aaKnown RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 TRMT10BQ6PF06 316 aaKnown RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 CEP128Q6ZU80 1094 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 TRIM74Q86UV6 250 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 SPATS2Q86XZ4 545 aaKnown RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 PNPLA1Q8N8W4 532 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 OR4L1Q8NH43 312 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 KLHDC7BQ96G42 594 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 PARD6BQ9BYG5 372 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 TXLNGYQ9BZA5 131 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 ARRDC1-AS1Q9H2J1 176 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 LRRC4CQ9HCJ2 640 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 PHPT1Q9NRX4 125 aaPredicted RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 MOCS1Q9NZB8 636 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 RAB21Q9UL25 225 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 OAS3Q9Y6K5 1087 aaKnown RBP15.96■□□□□ 0.15
CLIC4-203ENST00000489758 SCN8AQ9UQD0 1980 aa15.96■□□□□ 0.15
CLIC4-203ENST00000489758 PLXNA2O75051 1894 aa15.95■□□□□ 0.14
CLIC4-203ENST00000489758 PATE3B3GLJ2 98 aa15.95■□□□□ 0.14
CLIC4-203ENST00000489758 GOLGA8KD6RF30 607 aa15.95■□□□□ 0.14
CLIC4-203ENST00000489758 GOLGA8TH3BQL2 631 aa15.95■□□□□ 0.14
CLIC4-203ENST00000489758 RETP07949 1114 aa15.95■□□□□ 0.14
CLIC4-203ENST00000489758 SSTR1P30872 391 aa15.95■□□□□ 0.14
CLIC4-203ENST00000489758 MPLP40238 635 aa15.95■□□□□ 0.14
CLIC4-203ENST00000489758 PDE1CQ14123 709 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms