RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ZSCAN5AQ9BUG6 496 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 APOOQ9BUR5 198 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 KIFC1Q9BW19 673 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 ARRDC1-AS1Q9H2J1 176 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 MRM3Q9HC36 420 aaKnown RBP10.24□□□□□ -0.77
SKA1-204ENST00000488454 IL26Q9NPH9 171 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 PHPT1Q9NRX4 125 aaPredicted RBP10.24□□□□□ -0.77
SKA1-204ENST00000488454 NLE1Q9NVX2 485 aaPredicted RBP10.24□□□□□ -0.77
SKA1-204ENST00000488454 SYBUQ9NX95 663 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 GRHL1Q9NZI5 618 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 RIMKLBQ9ULI2 386 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 SOX13Q9UN79 622 aa10.24□□□□□ -0.77
SKA1-204ENST00000488454 ATXN2Q99700 1313 aaKnown RBP10.24□□□□□ -0.77
SKA1-204ENST00000488454 FAM237BA0A1B0GVD1 139 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 POM121BA6NF01 834 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 TLR4O00206 839 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 KHNYNO15037 678 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 VILLO15195 856 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 EIF3HO15372 352 aaKnown RBP eCLIP10.23□□□□□ -0.77
SKA1-204ENST00000488454 SRP72O76094 671 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 TTC4O95801 387 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 CFIP05156 583 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 POLBP06746 335 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 THEGLP0DJG4 465 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 KELP23276 732 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 TEAD1P28347 426 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 IGFALSP35858 605 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 MPLP40238 635 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 MAGEA3P43357 314 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 CSNK1EP49674 416 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 THOP1P52888 689 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 WDR4P57081 412 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 DHX9Q08211 1270 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 ITGA9Q13797 1035 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 TRADDQ15628 312 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 CHRNA6Q15825 494 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 HP1BP3Q5SSJ5 553 aaPredicted RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 HENMT1Q5T8I9 393 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 FAM151BQ6UXP7 276 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 ADAMTSL4Q6UY14 1074 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 KYAT3Q6YP21 454 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 ABI3BPQ7Z7G0 1075 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 CCDC25Q86WR0 208 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 PALM2Q8IXS6 379 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 MPP5Q8N3R9 675 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 SUMF1Q8NBK3 374 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 LRRN4CLQ8ND94 238 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 GABPB2Q8TAK5 448 aaPredicted RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 FBXO25Q8TCJ0 367 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 ZNF398Q8TD17 642 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 DTX3LQ8TDB6 740 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 PYROXD1Q8WU10 500 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 HDAC10Q969S8 669 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.23□□□□□ -0.77
SKA1-204ENST00000488454 CDKN2AIPNLQ96HQ2 116 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 SIGLEC10Q96LC7 697 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 TBATAQ96M53 351 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 PWWP2AQ96N64 755 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 EBNA1BP2Q99848 306 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 NUSAP1Q9BXS6 441 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 ASB8Q9H765 288 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 WDR26Q9H7D7 661 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 GDF3Q9NR23 364 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 TMEM74BQ9NUR3 256 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 GMPR2Q9P2T1 348 aaKnown RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 NCDNQ9UBB6 729 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 NFKBIL1Q9UBC1 381 aaPredicted RBP10.23□□□□□ -0.77
SKA1-204ENST00000488454 SLC6A14Q9UN76 642 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 CA5BQ9Y2D0 317 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 OR1A2Q9Y585 309 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 RPS6KL1Q9Y6S9 549 aa10.23□□□□□ -0.77
SKA1-204ENST00000488454 ZNF318Q5VUA4 2279 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 A0A1W2PR77 199 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 H0Y8X5 98 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 H7C0S8 307 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 CCL22O00626 93 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 INPP4BO15327 924 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A9O60656 530 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 USP1O94782 785 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 SLC25A14O95258 325 aaPredicted RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 PRAMEF1O95521 474 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ASMTLO95671 621 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 SYPP08247 313 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 HOXC4P09017 264 aaPredicted RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 PGAM1P18669 254 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A6P19224 532 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ITGALP20701 1170 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A1P22309 533 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A4P22310 534 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 NMBRP28336 390 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 MC4RP32245 332 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A3P35503 534 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A5P35504 534 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 TRIM23P36406 574 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 PPARGP37231 505 aaPredicted RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 ELK3P41970 407 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 PFN3P60673 137 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 THOC5Q13769 683 aaKnown RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 PDE1CQ14123 709 aaPredicted RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 GPR33Q49SQ1 333 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms