RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 GSDMBQ8TAX9 411 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 HM13Q8TCT9 377 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 LENG8Q96PV6 779 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 MYADMQ96S97 322 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ATP13A1Q9HD20 1204 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 RBM22Q9NW64 420 aaKnown RBP eCLIP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 EPS15L1Q9UBC2 864 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 COQ6Q9Y2Z9 468 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 PRUNE2Q8WUY3 3088 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 C7orf72A4D263 438 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 NEDD8-MDP1E9PL57 170 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 PEX11BO96011 259 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 CYBBP04839 570 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 PRKCGP05129 697 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 APRTP07741 180 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 EPHA3P29320 983 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 NUDT2P50583 147 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 SLC10A7Q0GE19 358 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 LY6G5CQ5SRR4 150 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 TANGO2Q6ICL3 276 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 TIGD7Q6NT04 549 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-221ENST00000488111 SETD3Q86TU7 594 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-221ENST00000488111 GPR180Q86V85 440 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 C10orf107Q8IVU9 208 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 DSELQ8IZU8 1212 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 KYQ8NBH2 561 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 BHLHE22Q8NFJ8 381 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-221ENST00000488111 BORCS5Q969J3 196 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 MAGEH1Q9H213 219 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 MYRFQ9Y2G1 1151 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 ILVBLA1L0T0 632 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 TRIM64CA6NLI5 447 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 HEPACAM2A8MVW5 462 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 H3BQ06 376 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-221ENST00000488111 CBX4O00257 560 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 BCAS2O75934 225 aaPredicted RBP13.67□□□□□ -0.22
COPS7B-221ENST00000488111 NFKB1P19838 968 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 HMOX2P30519 316 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 CSKP41240 450 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 MAGEA3P43357 314 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 MS4A2Q01362 244 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 DCDC5Q6ZRR9 648 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 Q7L0L9 218 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 NAT16Q8N8M0 369 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 IRF7Q92985 503 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 TEKT5Q96M29 485 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 CDRT15Q96T59 188 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 OSBPL11Q9BXB4 747 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 BBS2Q9BXC9 721 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 SPHK2Q9NRA0 654 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 PNPLA3Q9NST1 481 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 OLAHQ9NV23 265 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 DUS2Q9NX74 493 aaKnown RBP13.67□□□□□ -0.22
COPS7B-221ENST00000488111 GDE1Q9NZC3 331 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 UBP1Q9NZI7 540 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 TBC1D14Q9P2M4 693 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 FADS3Q9Y5Q0 445 aa13.67□□□□□ -0.22
COPS7B-221ENST00000488111 NYNRINQ9P2P1 1898 aaKnown RBP13.66□□□□□ -0.22
COPS7B-221ENST00000488111 TTC24A2A3L6 582 aaPredicted RBP13.66□□□□□ -0.22
COPS7B-221ENST00000488111 AIM2O14862 343 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 MTSS1O43312 755 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 SNAP91O60641 907 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 RNASEH2AO75792 299 aaKnown RBP13.66□□□□□ -0.22
COPS7B-221ENST00000488111 HLA-DQB2P05538 268 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 PIK3R1P27986 724 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 MAXP61244 160 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF33AQ06730 810 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 OLIG2Q13516 323 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 CEACAM7Q14002 265 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 TMEM53Q6P2H8 277 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 LINGO4Q6UY18 593 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 LRRC49Q8IUZ0 686 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 APCDD1Q8J025 514 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 MCUQ8NE86 351 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 BPIFB1Q8TDL5 484 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 ISOC1Q96CN7 298 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 SGF29Q96ES7 293 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 ASIC4Q96FT7 647 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 MSLNLQ96KJ4 702 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 CNDP1Q96KN2 507 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 SIGLEC10Q96LC7 697 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 KLHL32Q96NJ5 620 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 GAS2L1Q99501 681 aaPredicted RBP13.66□□□□□ -0.22
COPS7B-221ENST00000488111 IL12RB2Q99665 862 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 FEM1AQ9BSK4 669 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 KIAA1522Q9P206 1035 aaPredicted RBP13.66□□□□□ -0.22
COPS7B-221ENST00000488111 SHROOM3Q8TF72 1996 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 KLHL41O60662 606 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 PRAMEF11O60813 436 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 ADAM23O75077 832 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 TFPTP0C1Z6 253 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 CD70P32970 193 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 GRIA1P42261 906 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 BCAP31P51572 246 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 IL10RBQ08334 325 aa13.66□□□□□ -0.22
COPS7B-221ENST00000488111 PDE1CQ14123 709 aaPredicted RBP13.66□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF829Q3KNS6 432 aaPredicted RBP13.66□□□□□ -0.22
COPS7B-221ENST00000488111 SLC9B1Q4ZJI4 515 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms