RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 FAM187BQ17R55 369 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 GLYATQ6IB77 296 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 CRTC3Q6UUV7 619 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 CLYBLQ8N0X4 340 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 TNIP2Q8NFZ5 429 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 CNIH3Q8TBE1 160 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 FRS2Q8WU20 508 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 LZICQ8WZA0 190 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 MAML3Q96JK9 1138 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 TMLHEQ9NVH6 421 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 LCTP09848 1927 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 RLFQ13129 1914 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 KRBA1A5PL33 1030 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 DIRAS1O95057 198 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 ESRRBO95718 433 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 IMPDH1P20839 514 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 MAP2K4P45985 399 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 PLA2G16P53816 162 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 GSTM4Q03013 218 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 SEMA3BQ13214 749 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 TMEM53Q6P2H8 277 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 ENPP6Q6UWR7 440 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 OR6J1Q8NGC5 347 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 OR13J1Q8NGT2 312 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 NT5C3BQ969T7 300 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 MYRFLQ96LU7 910 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 ZNF560Q96MR9 790 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 BPIFA1Q9NP55 256 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 GID8Q9NWU2 228 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 MIOSQ9NXC5 875 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 NRCAMQ92823 1304 aa12.32□□□□□ -0.44
HSPG2-211ENST00000486901 CCDC154A6NI56 674 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ANXA9O76027 345 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 GSTT2P0CG29 244 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 GSTT2BP0CG30 244 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ADSLP30566 484 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 RFC2P35250 354 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 VBP1P61758 197 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 SFSWAPQ12872 951 aaKnown RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 SLC13A2Q13183 592 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 PAQR3Q6TCH7 311 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 CASP10Q92851 521 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 GLMNQ92990 594 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 PSMG2Q969U7 264 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 AURKBQ96GD4 344 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 TOR3AQ9H497 397 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 NANOGQ9H9S0 305 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 MRPL40Q9NQ50 206 aaKnown RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 PCDHGA8Q9Y5G5 932 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 A0A087X1B8 175 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ASPDHA6ND91 283 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 NPEPPSL1A6NEC2 478 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 TMEM221A6NGB7 291 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ZNF487B1APH4 448 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 FFAR3O14843 346 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 GPR42O15529 346 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 HS6ST1O60243 411 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 CBFA2T3O75081 653 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 E2F6O75461 281 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 RBP1P09455 135 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 SMPD1P17405 629 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 HK2P52789 917 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 CREB5Q02930 508 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 SIM2Q14190 667 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 SV2CQ496J9 727 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 C1QTNF12Q5T7M4 302 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ZNF549Q6P9A3 640 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 KCNN1Q92952 543 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 NCLNQ969V3 563 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 MYLPFQ96A32 169 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 SLC2A13Q96QE2 648 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 THUMPD3Q9BV44 507 aaKnown RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ALOXE3Q9BYJ1 711 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 CARS2Q9HA77 564 aaKnown RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 RNF112Q9ULX5 631 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 PCDHB3Q9Y5E6 796 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 B3GAT3O94766 335 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 B3GALT4O96024 378 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 GSNP06396 782 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 LBPP18428 481 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 IL12AP29459 219 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 FMO3P31513 532 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ZNF362Q5T0B9 420 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 FAM45BPQ6NSW5 357 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 PHACTR4Q8IZ21 702 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 ABHD11Q8NFV4 315 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 FAM45AQ8TCE6 357 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 TMEM125Q96AQ2 219 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 FUNDC2Q9BWH2 189 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 LIMD1Q9UGP4 676 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 GTF2IRD1Q9UHL9 959 aa12.31□□□□□ -0.44
HSPG2-211ENST00000486901 OAS3Q9Y6K5 1087 aaKnown RBP12.31□□□□□ -0.44
HSPG2-211ENST00000486901 POLR2AP24928 1970 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms