RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 RRM1P23921 792 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 OTX2P32243 289 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 DDIT3P35638 169 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 MAPK9P45984 424 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 SERPINB4P48594 390 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 GTF2BQ00403 316 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 RBPJQ06330 500 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 GPS2Q13227 327 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 PDCD2Q16342 344 aaPredicted RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD6-209ENST00000482596 MIDNQ504T8 468 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 TTC39BQ5VTQ0 682 aaPredicted RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 IZUMO3Q5VZ72 239 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 RPUSD3Q6P087 351 aaKnown RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 SLC30A9Q6PML9 568 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 IGFL2Q6UWQ7 119 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 DPY19L3Q6ZPD9 716 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 TRAPPC11Q7Z392 1133 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 PPP1R3BQ86XI6 285 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 WFDC8Q8IUA0 241 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 FMR1NBQ8N0W7 255 aaPredicted RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 PLD6Q8N2A8 252 aaKnown RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 CPSF7Q8N684 471 aaKnown RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 MYCT1Q8N699 235 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 CLEC1AQ8NC01 280 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 OR56A4Q8NGH8 313 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 OR1N1Q8NGS0 311 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 SHC3Q92529 594 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 MR1Q95460 341 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 PPP1R16AQ96I34 528 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 SLC38A3Q99624 504 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 AGXT2Q9BYV1 514 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 TM6SF1Q9BZW5 370 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 TGIF2Q9GZN2 237 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 TKTL2Q9H0I9 626 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 RBSNQ9H1K0 784 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 ZHX3Q9H4I2 956 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 PNPLA8Q9NP80 782 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 ANLNQ9NQW6 1124 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 MOSPD1Q9UJG1 213 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 L3MBTL1Q9Y468 752 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 SLC30A1Q9Y6M5 507 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 CCDC189A1A4V9 331 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 ZNF500O60304 480 aaPredicted RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 TM7SF2O76062 418 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 ZRANB2O95218 330 aaKnown RBP eCLIP6.4□□□□□ -1.381e-6■■■■□ 23.3
CHD6-209ENST00000482596 ANKRD34CP0C6C1 535 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 ARCN1P48444 511 aaKnown RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 SLC11A2P49281 568 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 CXCR3P49682 368 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 PLK1P53350 603 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 DLX5P56178 289 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 EVCP57679 992 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 MYL6P60660 151 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 DMTNQ08495 405 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 FAM174BQ3ZCQ3 159 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 CHRFAM7AQ494W8 412 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 CXorf57Q6NSI4 855 aaKnown RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 MRGPREQ86SM8 312 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 ZSCAN30Q86W11 494 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 P3H2Q8IVL5 708 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 LGI2Q8N0V4 545 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 DTWD1Q8N5C7 304 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 TAB3Q8N5C8 712 aaPredicted RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 SLC38A9Q8NBW4 561 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 PLA2G15Q8NCC3 412 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 ZNF274Q96GC6 653 aaPredicted RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 GBP5Q96PP8 586 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 DMRTA2Q96SC8 542 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 REEP2Q9BRK0 252 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 WRAP53Q9BUR4 548 aaKnown RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 XYLT2Q9H1B5 865 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 DMRT3Q9NQL9 472 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 BEX4Q9NWD9 120 aaPredicted RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 XPO7Q9UIA9 1087 aaKnown RBP6.4□□□□□ -1.38
CHD6-209ENST00000482596 CDC42EP3Q9UKI2 254 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 ZNF835Q9Y2P0 537 aa6.4□□□□□ -1.38
CHD6-209ENST00000482596 SPTBP11277 2137 aa6.4□□□□□ -1.39
CHD6-209ENST00000482596 CMYA5Q8N3K9 4069 aa6.4□□□□□ -1.39
CHD6-209ENST00000482596 C16orf96A6NNT2 1141 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 CLDN4O14493 209 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 THAP12O43422 761 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 SNAP91O60641 907 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 PRAMEF2O60811 474 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 ALOX12BO75342 701 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 FUCA1P04066 466 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 PCCBP05166 539 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 CAPN1P07384 714 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 CD58P19256 250 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 GKP32189 559 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 POLD2P49005 469 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 SLC12A1Q13621 1099 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 RAPGEF1Q13905 1077 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 TOB2Q14106 344 aaPredicted RBP6.39□□□□□ -1.39
CHD6-209ENST00000482596 LRRC14Q15048 493 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 DUOXA2Q1HG44 320 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 HEPHL1Q6MZM0 1159 aa6.39□□□□□ -1.39
CHD6-209ENST00000482596 CPLX2Q6PUV4 134 aaKnown RBP6.39□□□□□ -1.39
CHD6-209ENST00000482596 Q6ZPB1 254 aaPredicted RBP6.39□□□□□ -1.39
CHD6-209ENST00000482596 YTHDF3Q7Z739 585 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms