RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CLEC16AQ2KHT3 1053 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 EIF2S3LQ2VIR3 472 aaKnown RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 CRTC2Q53ET0 693 aaPredicted RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 ZNF648Q5T619 568 aaPredicted RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 FHL5Q5TD97 284 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 CEACAM20Q6UY09 585 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 ATCAYQ86WG3 371 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 PHF13Q86YI8 300 aaPredicted RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 Q8NA96 180 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 GALNT11Q8NCW6 608 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 C3orf20Q8ND61 904 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 CPT1CQ8TCG5 803 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 PIH1D2Q8WWB5 315 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 TEFMQ96QE5 360 aaKnown RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 SLC38A3Q99624 504 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 SELENOOQ9BVL4 669 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 CATSPERBQ9H7T0 1116 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 NLRC4Q9NPP4 1024 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 TAB2Q9NYJ8 693 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 TAS2R14Q9NYV8 317 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 DTLQ9NZJ0 730 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 ADAM22Q9P0K1 906 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 KCND3Q9UK17 655 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 MAP4K5Q9Y4K4 846 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 SLC30A1Q9Y6M5 507 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 CCDC168Q8NDH2 2452 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 FN1P02751 2386 aaKnown RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 PCSK5Q92824 1860 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 ARHGAP42A6NI28 874 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 TCP11X1B4DZS4 312 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 PDE2AO00408 941 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 POLR1CO15160 346 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 FGF10O15520 208 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 KIAA0754O94854 1291 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 TEAD1P28347 426 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 ERCC5P28715 1186 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 PMS2P54278 862 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 PPP1CAP62136 330 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 HHEXQ03014 270 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 FOXM1Q08050 763 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 LAMB3Q13751 1172 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 LBRQ14739 615 aaKnown RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 DPCR1Q3MIW9 517 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 FAM69BQ5VUD6 431 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 FAM199XQ6PEV8 388 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 IYDQ6PHW0 289 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 ADAMTSL4Q6UY14 1074 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 RFX8Q6ZV50 586 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 MSANTD4Q8NCY6 345 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 OR10G6Q8NH81 332 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 CT55Q8WUE5 264 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 AHCYL2Q96HN2 611 aaKnown RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 COX14Q96I36 57 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 PSKH2Q96QS6 385 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 MCCC1Q96RQ3 725 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 DPYSL5Q9BPU6 564 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 SNRNP25Q9BV90 132 aaKnown RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 ULBP3Q9BZM4 244 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 DHX35Q9H5Z1 703 aaKnown RBP9.67□□□□□ -0.86
COL4A5-204ENST00000477429 ARFGAP3Q9NP61 516 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 CASS4Q9NQ75 786 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 AP4E1Q9UPM8 1137 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 KCTD3Q9Y597 815 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 ESPL1Q14674 2120 aa9.67□□□□□ -0.86
COL4A5-204ENST00000477429 MN1Q10571 1320 aaPredicted RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 FADS2P1A8MWK0 482 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 MKRN2OSH3BPM6 223 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 EEF2KO00418 725 aaKnown RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SNX2O60749 519 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 VPS4BO75351 444 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 RFPL1O75677 317 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 PGLSO95336 258 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 TCF4P15884 667 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 TYRP1P17643 537 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SOX5P35711 763 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 GPR1P46091 355 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 PPM1FP49593 454 aaPredicted RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SEPHS1P49903 392 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 POLR2FP61218 127 aaKnown RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 AP1S1P61966 158 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 POLR2LP62875 67 aaKnown RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 UBE2IP63279 158 aaKnown RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 DPTQ07507 201 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 IL10RBQ08334 325 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 IL10RAQ13651 578 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SEPT6Q14141 434 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 MAP7Q14244 749 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 LRRC66Q68CR7 880 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 C6orf15Q6UXA7 325 aaPredicted RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 CERS6Q6ZMG9 384 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 CHST15Q7LFX5 561 aaPredicted RBP9.66□□□□□ -0.86
COL4A5-204ENST00000477429 ZNF677Q86XU0 584 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 ESX1Q8N693 406 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 PAF1Q8N7H5 531 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 C19orf60Q96EN9 201 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 SCRN2Q96FV2 425 aa9.66□□□□□ -0.86
COL4A5-204ENST00000477429 C9orf72Q96LT7 481 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms