RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 OSER1Q9NX31 292 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 RBPJLQ9UBG7 517 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 WARS2Q9UGM6 360 aaKnown RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 RNF112Q9ULX5 631 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 GINS2Q9Y248 185 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SH3BP1Q9Y3L3 701 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 DNAJC15Q9Y5T4 150 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 HSPE1-MOB4S4R3N1 261 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 LAMA3Q16787 3333 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TCRBV5S2A0A599 114 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SUPT3HB4E1H0 165 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ARNTLO00327 626 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 PLOD2O00469 737 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 MGEA5O60502 916 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TPST1O60507 370 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SERPINB7O75635 380 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 RPP40O75818 363 aaKnown RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 S1PR4O95977 384 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 MT-CYBP00156 380 aaPredicted RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 ALDOCP09972 364 aaKnown RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 RHOQP17081 205 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 NELFEP18615 380 aaKnown RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 ITIH1P19827 911 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CAPN3P20807 821 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CD9P21926 228 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 VARSP26640 1264 aaKnown RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 EPHX2P34913 555 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 YWHAHQ04917 246 aaPredicted RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 ITKQ08881 620 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ZNF792Q3KQV3 632 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ATP6AP1LQ52LC2 224 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CLEC6AQ6EIG7 209 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 UGT3A1Q6NUS8 523 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ELMSAN1Q6PJG2 1045 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 RETREG3Q86VR2 466 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ARHGAP12Q8IWW6 846 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 EID3Q8N140 333 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 PARP8Q8N3A8 854 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 GPRC5AQ8NFJ5 357 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 GLT1D1Q96MS3 346 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ZNF599Q96NL3 588 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 LPIN3Q9BQK8 851 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 ACBD6Q9BR61 282 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 CHID1Q9BWS9 393 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 SLC39A8Q9C0K1 460 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 NACA2Q9H009 215 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 MAGIXQ9H6Y5 334 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 IL1RL2Q9HB29 575 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 FANCEQ9HB96 536 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 NECTIN3Q9NQS3 549 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 EGFL7Q9UHF1 273 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 DAPK2Q9UIK4 370 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 PDE10AQ9Y233 779 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TPRKBQ9Y3C4 175 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TNPO3Q9Y5L0 923 aaKnown RBP6.09□□□□□ -1.43
HERC4-209ENST00000473533 GPR45Q9Y5Y3 372 aa6.09□□□□□ -1.43
HERC4-209ENST00000473533 TANC1Q9C0D5 1861 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 MBLAC1A4D2B0 266 aaPredicted RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 MROH6A6NGR9 719 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 FXYD1O00168 92 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 DLGAP1O14490 977 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 GNGT2O14610 69 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 KDM1AO60341 852 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PRSS23O95084 383 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SCELO95171 688 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 IGLV3-25P01717 112 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 S100BP04271 92 aaPredicted RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 CCDC159P0C7I6 412 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PRR35P0CG20 571 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 AKAP5P24588 427 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 BMXP51813 675 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ARHGDIAP52565 204 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PLK1P53350 603 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 TSPY1Q01534 308 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ACVR1Q04771 509 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 TGFBIQ15582 683 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ZC3H12BQ5HYM0 836 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 MARCH8Q5T0T0 291 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 FAM182AQ5T1J6 154 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 GPR158Q5T848 1215 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 MANEALQ5VSG8 457 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 EGFLAMQ63HQ2 1017 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 GLYATQ6IB77 296 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 TP53INP2Q8IXH6 220 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 UMODL1-AS1Q8N2C9 162 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 CARNMT1Q8N4J0 409 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 OR9I1Q8NGQ6 314 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 NDRG1Q92597 394 aaKnown RBP6.08□□□□□ -1.44
HERC4-209ENST00000473533 VMP1Q96GC9 406 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 PCED1BQ96HM7 432 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 RNF145Q96MT1 663 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 OSMRQ99650 979 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 MROQ9BYG7 248 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SIK2Q9H0K1 926 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ADNPQ9H2P0 1102 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 ABHD16BQ9H3Z7 469 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 CATSPERZQ9NTU4 200 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SCN3BQ9NY72 215 aa6.08□□□□□ -1.44
HERC4-209ENST00000473533 SLC2A6Q9UGQ3 507 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms