RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 GATAD2AQ86YP4 633 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 HID1Q8IV36 788 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 PPIL6Q8IXY8 311 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 PHACTR4Q8IZ21 702 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 ZNF398Q8TD17 642 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 OR1E3Q8WZA6 343 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 GLYATL1Q969I3 302 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 DNAJC1Q96KC8 554 aaKnown RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 VPS35Q96QK1 796 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 TRIM51Q9BSJ1 452 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 FRMD8Q9BZ67 464 aaPredicted RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 SLC13A1Q9BZW2 595 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 IL22Q9GZX6 179 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 CAAP1Q9H8G2 361 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 NLE1Q9NVX2 485 aaPredicted RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 RIMKLBQ9ULI2 386 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 TMEM98Q9Y2Y6 226 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 DGKBQ9Y6T7 804 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 PRSS38A1L453 326 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 FAM187AA6NFU0 413 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 H7C0S8 307 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 GAPDHSO14556 408 aaPredicted RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 TM4SF5O14894 197 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 RAD51CO43502 376 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A9O60656 530 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 AVILO75366 819 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 SRP72O76094 671 aaKnown RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 SLC25A14O95258 325 aaPredicted RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 PRAMEF1O95521 474 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 ASMTLO95671 621 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 FUCA1P04066 466 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A6P19224 532 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A1P22309 533 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A4P22310 534 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 DGKAP23743 735 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 MGAT1P26572 445 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A3P35503 534 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A5P35504 534 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 POLD2P49005 469 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 MRPS25P82663 173 aaKnown RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 PEX6Q13608 980 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 TSTD2Q5T7W7 516 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 IZUMO3Q5VZ72 239 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 KCTD16Q68DU8 428 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 DOK6Q6PKX4 331 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 NLRP9Q7RTR0 991 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 KANSL1Q7Z3B3 1105 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 RD3Q7Z3Z2 195 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 HOOK3Q86VS8 718 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 RBFAQ8N0V3 343 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 SLC25A45Q8N413 288 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 PPHLN1Q8NEY8 458 aaKnown RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 PEX13Q92968 403 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 PDXPQ96GD0 296 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 CDKN2AIPNLQ96HQ2 116 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 TBATAQ96M53 351 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 ASB8Q9H765 288 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A7Q9HAW7 530 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A10Q9HAW8 530 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 UGT1A8Q9HAW9 530 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 TRIM39Q9HCM9 518 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 CYP4F12Q9HCS2 524 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 XAB2Q9HCS7 855 aaKnown RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 SPASTQ9UBP0 616 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 APOBEC3BQ9UH17 382 aaKnown RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 MOSPD1Q9UJG1 213 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 TMPRSS11EQ9UL52 423 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 TCAF1Q9Y4C2 921 aa11.85□□□□□ -0.51
VPS13D-204ENST00000469054 OAS3Q9Y6K5 1087 aaKnown RBP11.85□□□□□ -0.51
VPS13D-204ENST00000469054 CCDC78A2IDD5 438 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 NEMP2A6NFY4 417 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 EFCAB8A8MWE9 144 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 SMAPO00193 183 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 CCL22O00626 93 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 FLRT2O43155 660 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 SH3BP5O60239 455 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 IVLP07476 585 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 CTSEP14091 401 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 MC4RP32245 332 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 ARSDP51689 593 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 CRADDP78560 199 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 NFATC2Q13469 925 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 MORF4L2Q15014 288 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 PRRT3Q5FWE3 981 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 ARMC3Q5W041 872 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 PHYKPLQ8IUZ5 450 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 MNS1Q8NEH6 495 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 ZNF548Q8NEK5 533 aaPredicted RBP11.84□□□□□ -0.51
VPS13D-204ENST00000469054 OR13J1Q8NGT2 312 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 LMX1AQ8TE12 382 aa11.84□□□□□ -0.51
VPS13D-204ENST00000469054 PTCD2Q8WV60 388 aaKnown RBP11.84□□□□□ -0.51
VPS13D-204ENST00000469054 SCARF2Q96GP6 870 aaPredicted RBP11.84□□□□□ -0.51
VPS13D-204ENST00000469054 ZNF778Q96MU6 729 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms